Oncorhynchus kisutch (coho salmon): 109893781
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Entry
109893781 CDS
T09179
Name
(RefSeq) rho guanine nucleotide exchange factor 10 isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109893781
03036 Chromosome and associated proteins [BR:
oki03036
]
109893781
Membrane trafficking [BR:
oki04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109893781
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
109893781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
CFAP43_N
AAA_30
Motif
Other DBs
NCBI-GeneID:
109893781
NCBI-ProteinID:
XP_031684935
Ensembl:
ENSOKIG00005002454
LinkDB
All DBs
Position
LG7:complement(38987359..39060444)
Genome browser
AA seq
1470 aa
AA seq
DB search
MPRETATSMDIVEDFPPPPPEMLADEVPYADEEEGEQFEFDDSGDEFPEADRPPHAPPAP
DYGGKAQINGVAPHPQQEGPDPRPSNPEPAAAADTDTVAAEPPVPVAMATTDTVASAPDP
PVANAPTETTAPVAAAEGDKTSSVPAGADRDLPPPPPPEDSTPVGTDSVNTNKEVSSDDP
PPAVPRTTSQRKVNPYSVIEITPLQLEQQHGPVPTSSSPVERVGGEGEREGKGQEVPPAS
PLCVPPGYSVPVPCGYATPSGVPLITPAYTTPVIIRHFSVDEEDTVVGTGNISVDIEEYP
AIREEDALSKWVSDPANTAWMENPDEVIYDDVPRENSDSTTEPDEMIYDDVEFGEEGCGS
SLDNGWSSSEFESYDEQSDGEGRGENGLPDAFMRGKPPQRKTHLSQDLTRLKEHYEKKMK
DLMANTVGTVELQQIKQKHEQKMQKLVKAARDGTKDGLEKTKAAVRRGRSYIKTHCHERK
STCFEDEESELFIEVECFNMEPVLSPVPEGLSQQQVVRRCILGSILESEKNYLDALKRIL
EQYEKPLLEIEPRLLSDRKLKVTFYRIREILQCHALFQIALACRVAEWDSLEMIGDVFVA
SFSKSMVLDAYCEYVNNFSTAMAVVRKTCASKPSFLDFLKQRQDTSSDRATLYGLMMKPI
QRFPQFILLLQDMLKNTPAGHSDRLPLQMALTELETLAEKLNEKKREADQRCEIRHIAKA
MNERYLNKLLSNGSRYLIRSDDIVETVYNDHGEVIKTKERRLFLLNDVLMCATPNVRCSV
DGSGSGNAALGQKFLLKWSVPLNFVDVVEFGSSEDMGDNSRFTPQPHSGEKVIINAKPNK
LYMGPGQLYQDLQNLIHDLSLVNQISSMIGSLKGNYQNVNPAVAHDWVSGLQRLILKKEE
EIRAADRCRIQLQLPGKPDKSGRPTYFSAVFNTFSPAIKQSWISNLQMAKLALEEDNLQG
WFFAEDDGNQIKKQKHPLLLRQMPVVMSKLQEFKVECAVHNPEPHINIESTADTPALGHG
CVWVASCTNQMGQIAIVAMQNSSPKVTECFNVESRILCMAYVPMEQRTQENGEGNPENNH
SSAGKTSDAPTVCLGMEEGSIIVYKSSQRSKKVRLQHFFTPDKSTVTSLVHKKQCLYTGL
VNGSVTIYSRAQDGSWNPDSPKVLKLGVLPVKAMLAVEEHVWASSGGQVFIISTTTHTVE
RQLEAHQEEGMVVSHMVVAGVGIWIAFSSGSTLRLFHTETLEDLQDINIATPVHNILAGN
QRVSVSSLLVCHGLLLVGTNLGVTVALSVPRLQGIPKVTGRGMVSFHAHHGPVKFLTMAA
AVCNRPSGNPGSSLPSQPGGTKDGEKAQASPPPTPGSTPTLAPTQGRGVWLGEAGCTSMA
LQDSLSSSCGSLALSQGSLEHGLEDGAIYDLVNDPAHHQRGRRVQKVDVSSLLVVSGGLG
HHRVNRKTKQSRQEETVSNIMVWQIPLLNM
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgcccagagaaacagcaaccagtatggacatcgtggaagacttccctcccccgcctcct
gaaatgttggcggacgaggtgccctatgccgatgaagaagagggggagcagtttgagttt
gatgacagtggggatgagttccctgaggcagaccggccaccccatgcccctccagcccca
gattacgggggcaaggcccagatcaatggtgtggcacctcacccacagcaggaaggacca
gacccccggccctccaacccggagcccgcagcagcagcggacacagacacagtggcagct
gaaccaccagttccagtagccatggctacaacggacacagtggcatcagcaccggatcct
ccggtagccaatgctccaacagaaacaacagctccagtggcagcagcagaaggggacaag
acttcatctgtcccagctggcgcagaccgtgacttaccccctcctccacccccagaggac
tccactcctgtaggaacagactccgtgaacacaaataaggaagtgtccagtgatgaccct
cccccggccgtccccaggaccacctcccagaggaaagtcaacccctactctgtgattgaa
atcacccccctccaactggagcagcagcatgggcccgtccctacctcttcctcaccggtt
gagagggtaggaggagagggggagagggaggggaagggccaggaagttccccccgccagc
cccctctgtgtcccaccgggctactctgtgcccgtgccctgtgggtacgccaccccctct
ggtgtgcccctcattacgccagcctacaccacgcccgtcatcatccgacacttctccgtg
gacgaggaggatactgtggtggggacaggcaacatttctgttgatattgaagagtatcct
gccatcagagaggaggatgctttgtctaaatgggtgtcagaccctgcaaacacagcctgg
atggaaaatccagatgaagtcatttatgatgacgtgcccagagagaactctgactccact
acagagccagacgagatgatctatgatgatgtggagtttggggaggagggctgtggcagc
tccctggacaacggttggagttccagcgagtttgagagctatgacgagcagagtgacggg
gagggccgcggggagaatggcctgcctgacgccttcatgagagggaagcccccacaaagg
aagacccatctttctcaagatctgacacgcttgaaagaacactatgagaaaaagatgaaa
gatcttatggcaaatacagtgggaacagtagagctgcagcagattaaacagaaacacgag
cagaagatgcaaaagctggtgaaggcagcgagagatgggaccaaagacggcctggagaaa
accaaagcagcagtgagaaggggaaggtcgtatatcaagacccactgtcacgagaggaag
tcaacctgttttgaggatgaggagtcggagctattcatcgaagtggaatgcttcaacatg
gagccagtgctcagtcccgtccctgagggtctctcacaacaacaggtggtgaggaggtgt
atactgggctccatattagagagtgagaagaactatctcgatgcactgaagcggatttta
gagcaatacgaaaagccacttttggagattgagcccaggttgctaagcgataggaagctg
aaggtgacattctatcgtatccgggagattctccagtgccacgccctgttccagatcgcc
ctggcgtgccgcgtggccgagtgggacagtctggagatgatcggggacgtctttgtagcc
tcgttctccaagtccatggtgctggatgcctactgtgagtatgtgaacaacttcagcaca
gccatggcggtggtcaggaagacctgtgcctccaaacccagcttcctagatttcctcaag
caacgtcaggacaccagcagtgaccgggccactctctacggactcatgatgaagcccatc
cagagattccctcagttcattctactgctgcaggacatgttgaagaacacaccagcaggc
cacagtgacagactgcccctacagatggccctgacagaactggagaccctggctgaaaag
ctcaatgagaagaagcgggaggctgaccagcgctgtgagatcagacacatagccaaggcc
atgaacgaacgctacctcaacaagcttctgagtaatggcagccgctacctgattcgctct
gatgacatagtggagacggtctacaatgaccacggagaggtgatcaagaccaaggagcga
cgccttttcctgctcaacgacgtgctcatgtgtgccacgcccaacgtccggtgcagtgtg
gatggcagtggtagtggcaacgccgccctgggtcagaagttcctgctgaagtggagtgtc
cctctgaactttgtggacgtagtagagtttggctccagtgaagacatgggtgacaacagc
cgcttcaccccacaaccccactctggagagaaggtgatcatcaatgccaaaccaaataag
ctgtacatgggtccaggccagctgtaccaggacctgcagaacctcatccacgacctcagc
ctggtcaaccagatctccagcatgatcggaagcctcaagggaaactaccagaacgttaac
cctgcggtggcccatgattgggtgtcaggtctgcagcgtctcatcctgaagaaggaggaa
gagatccgggctgcagaccgctgtaggatccagctgcagctgcctggcaaaccggacaaa
tctggcaggcccacatacttcagtgcagtgttcaatacgttctctcctgccatcaaacag
tcatggatcagtaacctgcagatggccaagcttgctctggaggaggacaacctgcagggc
tggttctttgcagaggatgatggtaaccagatcaagaagcagaaacatcctctcctgctc
aggcagatgcctgtggtcatgtccaaactacaggagttcaaggtggagtgtgcggtccat
aaccccgagccccacatcaacatagagagcacagcagacacccctgctctgggacacggc
tgtgtgtgggtggcgagctgcaccaaccagatgggtcagatagccatcgtagccatgcaa
aactccagccctaaagtgacagagtgcttcaatgttgagtcacggatcctgtgtatggcg
tacgtacccatggagcagaggacccaggagaacggggaggggaaccccgaaaataatcac
tcctcagcagggaagaccagtgatgcccccacggtctgtctgggcatggaggagggcagc
atcatagtctataagagcagccagagatccaagaaggtccgtctgcaacacttcttcacc
ccagacaagtctaccgtgaccagcctggtacacaagaagcagtgtttatacactggccta
gtgaacggctcagtcaccatctactccagagcacaagatggctcgtggaatccagactct
cctaaggtgctgaagctgggggttctgccagtgaaggccatgctagctgtggaggaacat
gtctgggcttcctctggaggacaagtcttcatcatcagcactaccacacacactgtggag
aggcagctggaggcccaccaggaggagggcatggtggtatcccacatggtggtggctggg
gtgggtatctggatagccttcagctctgggtccaccctcagactgttccacacggagaca
ctggaggatctacaggacatcaacatcgctacacctgtacacaacatactggctgggaac
cagagggtctcagtcagcagtctgctggtgtgccatggtctgctgctggtggggaccaac
ctgggggtgacagtggccctctctgtccccagacttcagggaatccccaaggtcacagga
cggggcatggtatccttccacgcccaccatggcccagtaaagttcctcaccatggcagcc
gcggtgtgcaaccggccctctggcaacccaggcagcagcctacctagccagccaggaggc
accaaggatggggagaaggcccaggcctccccacctccaaccccaggctccacacccact
ctagctcccacccagggccggggagtgtggctaggggaggcaggctgcacttccatggcc
ctccaggactccctgtcctcctcctgtggctccctggctctgtcccagggctctctggag
cacgggctcgaggacggggccatctatgacctggtcaatgatccggcccaccaccagagg
ggcaggagggtccagaaggtggacgtcagctctctgctggtggtttcaggggggctgggt
caccacagggtcaacaggaagaccaaacagtcccgtcaggaggagactgtgtccaacatc
atggtgtggcagatccctctactcaacatgtga
DBGET
integrated database retrieval system
