Oncorhynchus kisutch (coho salmon): 109893890
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Entry
109893890 CDS
T09179
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109893890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109893890
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109893890
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
SALM family
109893890
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
109893890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
C2-set_2
FN3_DSCAM-DSCAML_C
C2-set_3
Ig_PDGFR_d4
Ig_5
Motif
Other DBs
NCBI-GeneID:
109893890
NCBI-ProteinID:
XP_020342681
Ensembl:
ENSOKIG00005016116
UniProt:
A0A8C7G4X2
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All DBs
Position
LG7:complement(25344312..25393636)
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AA seq
793 aa
AA seq
DB search
MEKLLVCLLVIGMAVKAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLAD
NFVTSIKRKDFANMTRLQDLTLSRNTISFITPHAFSDLENLRALHVNSNRLTRISNDTFS
GMSKLHHLILNNNQLMLIHLGAFNDLLALEELDLSYNNLESIPWEAIQRMTSLHTLSLDH
NMIDYIPEETFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMNPSSFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPQHLSGRYFWSIPEEEFLCEPPLITRYSHEMRVLE
GQRVALRCKARGDPEPAIHWISPEGKLVSNSSRTLVYTNGTLDILISTVKDTGSFTCISS
NPAGEAHQTVELLIIKLPHISNSTNNIQEPDPGSSDISTSTRAGANGSNHTGDTKTSPDK
RVVIAEATSSTALIKFNFQRNIPGIRMFQIQYNGSYDDSLVYRMIPPTSKNFLVNNLAAG
TSYDLCVLAIYDDGITSLTATRVVGCVQFTTESEYLRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNTSDSGKGTLVTNVHSQTNGAQSQGCTVNPSVSKQAMGGSGSEG
GGGGSIKAAGHVPDTLTDSSETSLPDCSTATSLVSQSWNTPGSSGSLKPKRKPAPKPSAT
ASVTPEPKIEALPNAETQNTNRNNSTALQHPPAPVFHSPLPYSRIKDTPILRRAHPRPSS
KYLTLPVEGVRAKRRYSLNEDSSKHHCYIGVTKLGNMWSKRSKSMNGMLLQQENIDSGKA
TFSSSEWILESTV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgctggtctgtctgttggttattggaatggcagtgaaggcccagatctgt
ccgaagcgctgtgtctgtcaaatactatctcccaatcttgcaaccctctgtgccaaaaaa
ggtctcctctttgtccccccgaacattgacaggcacaccgtggagctacggctggcagac
aacttcgtcaccagcatcaagaggaaagactttgccaacatgaccaggttgcaggacctc
accctgtcaaggaataccattagcttcatcacgccacatgcgttttctgacctggagaac
ctccgcgccttgcacgtgaacagcaaccggctgacccggatatccaacgacacctttagc
ggcatgtccaagctgcaccacctgatcctcaacaacaaccagctgatgttgatccacctg
ggggctttcaatgatctgctggccctggaggagctcgacctgtcctacaacaacttggag
tccatcccctgggaggctatccagaggatgacgagcctccacaccctcagcctggaccac
aacatgatcgactacattcctgaggagaccttttctcttctgcaaaagctcaaccgcttg
gacgtaacctcaaataagttacagaagcttcctccagatcctctgttccagcgggcccag
gttttggccacgtctgggatcatgaacccttcctcgttcgcactgagcttcggcgggaac
ccactgcactgcaactgtgagctgctgtggttgaggcgcctgagtcgagaggatgatctg
gagacatgcgcatcgccgcagcacctctctggacgctatttctggtccatcccagaggag
gagttcctgtgtgaacctcctctcatcacccggtactcccatgagatgagggtgctggag
ggccagagggtggccctgaggtgcaaggccaggggggaccctgagcctgccatacactgg
atctctccagaggggaagctggtgtcgaactcctcccggacgttggtctacacgaatgga
accctggacattttgatcagcactgtgaaggacacaggatccttcacctgcatctcgtcc
aacccggcgggtgaggcacatcagactgttgagctgctgattatcaaactcccacacatc
tccaacagcaccaacaacatccaggagcctgaccctggctcttcagacatctccacatcc
accagggctggggcaaatggcagcaaccacactggagacaccaaaactagtccggataag
agagtggtcatcgctgaggccacatcctccacagcactcatcaagttcaacttccagagg
aatatacctgggatccgcatgttccagattcagtacaatggcagttatgatgactctctt
gtgtacagaatgattccccccacaagcaaaaacttcctagtcaataacctggctgctgga
acgtcgtatgacctgtgtgttctggccatatacgacgacggtatcacttccctcaccgcc
acccgtgtggtgggctgcgtccagttcaccaccgagtctgagtacctgcgctgtcacttc
atgcagtcccagttcctgggaggcaccatgatcatcatcatcggcggcatcatcgtggcc
tccgtcctcgtcttcatcatcatcctcatgatccgctataaggtctgcaacaccagtgac
tcgggcaaaggcacattggtcaccaacgtccactcccagaccaatggggcgcagtctcaa
gggtgcaccgtcaatccctctgtgtccaaacaggccatgggagggtcggggtcagaggga
gggggaggagggtctataaaggccgctgggcacgtgccagacactctgacggactcatct
gagacctctctcccagactgctccactgctacttctctggtgagccagagctggaacacg
cctggctcctcagggtctctgaagccaaagcgcaagcctgcgccaaagccctccgctact
gcttctgtcacccctgagcccaagatagaggccctccccaacgctgagacccagaacacc
aaccgcaacaactccacggctctgcagcatccccctgccccggtattccactccccccta
ccctactcacgcatcaaggacacgcccatattaagacgcgcacaccccagaccatcctcc
aagtacctgaccttaccggttgaaggggtgagggccaaacgtaggtactctctaaacgag
gactcgtccaagcaccactgctacattggggtaacaaaacttgggaatatgtggtctaag
cggagtaagtccatgaatgggatgctacttcaacaggaaaatatagacagtggcaaggcc
accttttccagttcagagtggattctagaaagtactgtgtga
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