Oncorhynchus kisutch (coho salmon): 109894159
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Entry
109894159 CDS
T09179
Name
(RefSeq) PDZ and LIM domain protein 3
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109894159
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109894159
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
109894159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
109894159
NCBI-ProteinID:
XP_020342991
Ensembl:
ENSOKIG00005014928
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All DBs
Position
LG7:complement(8852557..8871815)
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AA seq
313 aa
AA seq
DB search
MTLDVVLNGPAPWGFRLTGGKDYNQPLTISRITPGSKAAVANLCPGDVILAIEGIPAEDM
MHCEAQNKIKDAIYQLILTVQRPETRLWSPQVTEDGKANPFKINLEAEQQEFKPIGTGHN
RKAQPFIAAANIDDHRQVVSTAYNTPIGLYSSGNIQDAMHGQMRGLVQDKPEGSKTLTSI
EESDVYRMLLKDQEEPQEPRQSGSFKALQDFVDGTRPMVTRTVRAPMTKPPPPTGNLQKL
PLCDKCGNGIVGTVVKARDKFRHPSCFVCTDCDVNLKQKGYFFVEGQLYCETHARARTRP
PEGHDLVTAFPSA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgacactggatgttgtcctaaatggcccggccccgtgggggttccgactgactggcgga
aaggactacaaccagcccctcaccatctccaggatcactccgggcagtaaggcagctgtg
gccaacctgtgtcctggtgatgtcatcctggccatcgagggcatcccggcggaggacatg
atgcactgtgaggcccagaacaagatcaaagacgccatctaccagctcattctcaccgtc
cagagaccagaaaccaggctatggtcgcctcaagtcacggaagacgggaaagccaacccg
ttcaaaatcaacttggaggctgagcaacaggagttcaaacccattggtacgggtcacaac
cgcaaggcccagccctttatagctgcagctaacatcgacgaccatcgtcaggtggtgagc
acagcctacaacacccccataggcctctactcctcaggcaacatccaggacgccatgcac
ggacagatgaggggcctggtccaggacaagccagagggtagcaagacgctgacctccatc
gaggagtctgatgtgtaccgcatgctcctgaaagaccaggaggagccccaggagccccgg
caatcaggttccttcaaggccctgcaggactttgtcgacggcactcgccccatggtgacg
aggacagtgagagcgcccatgactaagccaccgccgcccacaggaaacctgcagaaactg
cccctgtgtgacaagtgtggaaacggcattgtgggcacagtggtgaaagcgagagacaag
ttccgccaccctagctgcttcgtgtgcaccgactgtgacgtcaaccttaaacagaagggc
tacttcttcgtggagggccaactgtactgcgagacccacgctcgagcccgaacaagaccc
ccggagggccatgaccttgtcactgctttcccctcggcatag
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