Oncorhynchus kisutch (coho salmon): 109894184 Help Entry 109894184         CDS       T09179                                  Name (RefSeq) protein PAT1 homolog 1-like   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki03018   RNA degradation Brite KEGG Orthology (KO) [BR:oki00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     109894184  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oki03019]     109894184 Messenger RNA biogenesis [BR:oki03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      109894184   mRNA degradation factors    5'-3' decay     Decapping complex      109894184 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PAT1 HTH_AraC Motif Other DBs NCBI-GeneID:  109894184 NCBI-ProteinID:  XP_020343048 Ensembl:  ENSOKIG00005017198 LinkDB All DBs Position LG7:10739520..10767512 Genome browser AA seq 814 aa AA seqDB search MFRFQSLDEDCTLEKEEGLVEEEDEIDQFNDDTFGDGAIDDDWQEEHKRLAELEEQKNDG LGGLGLGTLGMGGMGGGNASTVHLPPPASRVPHPSSLPPPHHSLSSIPPPGLEERGGGDL AESLAMLILGVDPAIASVGGPAGPDDRSTGLPPPPSIPQQHHHPSQLPPHHQLTPSGLPP GPPHLSLLSYQQHQHLLRRGAAPMQQMNSHNIWENNLGFGPVSITPGLITQMEDSPLMSI IKEVGLPNRPPPMMSEDGRDLSERAPPPRSSSPVIGSPPVRAVPIGTPPKQPMSHAMNHH HHQQIHHPTAIHVRAPVQHRYPPSFPERISPNTLLNIANSPLCRPPFPAGVGPVLSQIQR AQMLNSQVAGFPRGCQGPPLLPGGGGFRPFFGQPPPHRMGPHPGGPPPPNHNHVPCPIIR HNTTHLHPQHRRMLTQRMQSRGGERGGRVGDWRSRDPYSNLMSQREKEWVAKIQMMQLQS TDPYLDDYYYQNYFEKLEKRQERDRDGVRKEHTTKLITPQVAKLEHTYRPVQFAGSLGKL TVSSVNNPRKMIDTVVTSRTDDEEKREKQVWNKRRQILYTVEKMYSLLLEVQDFEKRFMQ TPEEQREALLEQHKTHTLQLYSSLKEKEWDDRVSDEQCLLIMSVRKGKRLISRLIPFLPP LQAATVVMGIARNLPALAKKDKQDQVLCWLVEPIAVVISSLSSASLTDLLQELQGSEGQL SRVLQNKFGVTLLYLILSEGERMQSSNPTCQLMDDNRWTELVFSVTRELLNVPSSSLSPP LFTPPNLLSLFSRYVDRQRLELLQEKLQISALSR NT seq 2445 nt NT seq  +upstreamnt  +downstreamnt atgttccgttttcagtcccttgatgaagattgtaccctggagaaggaggaggggctggta gaagaagaagatgagattgaccagtttaatgacgacaccttcggagatggggccatcgac gatgactggcaggaggagcacaagcggctagccgagctcgaagaacaaaagaacgatgga ctcggaggtttagggctagggacactagggatggggggaatgggaggaggaaacgcctcc actgttcaccttcctcctcccgccagtcgcgtcccccatccgtcttccctcccaccacca catcactccctctcttcgattccccctccgggcctagaggagagggggggaggcgaccta gccgagtccctagccatgttgattctcggggtggacccggccatcgccagtgtgggtggt ccagccgggcctgatgaccggtccactggtctccctcctcccccttccattccccagcag catcaccacccctcccagctccctccccaccaccagctgaccccgtctgggctacccccc ggcccaccgcacctctccctgcttagctaccagcagcatcagcaccttctacgacgaggg gcggcccccatgcaacagatgaactctcacaatatctgggagaacaacttgggattcggg cctgtgagcatcacccctggactaatcactcaaatggaggacagtccacttatgtctatc atcaaggaagtggggctgcccaatcggcctccgccaatgatgagcgaggatgggcgggac ttgtcggaaagggcccccccgcctcgctcgtcctctcccgtgattggtagcccaccagtg agggctgtgcctatcgggactccgcccaagcagccgatgagtcatgctatgaatcatcat catcatcagcagatccaccaccccaccgccattcatgtgcgagccccggtccaacaccgc taccccccttccttccctgagcgcatctctcccaacaccctcttaaacatcgctaactct cctctgtgtcgtcctccgttcccggccggcgtgggccccgttctgtcccagatccaacgt gcccagatgctcaactctcaggttgctggcttccccaggggctgtcagggtcccccgttg ctgcctggtggcggaggcttcagacccttcttcggccagccccctccccacaggatgggt ccccaccccggcgggcccccccctcccaaccacaaccacgtcccttgtcccatcatccgg cacaacaccacgcacctgcacccccagcaccgccgcatgctcacccagaggatgcagagt agaggaggtgagcgtggcgggcgtgttggggactggaggagcagggacccctacagtaac ttgatgagccagagggagaaggagtgggtggccaagatccagatgatgcagctgcagagc actgatccctacctggatgactactactaccagaattactttgagaagttggagaagagg caggagcgagacagagacggcgtgaggaaggagcacaccaccaaactcatcaccccccag gtggccaagctggaacacacctacagaccagtgcagtttgcaggctcgttgggtaagcta actgtgtccagcgtcaacaaccccaggaagatgatcgacacggtggtgactagtcgcact gatgacgaggagaagagagagaaacaggtgtggaataagagacggcagatcctctacact gtggagaagatgtacagtttgctgctggaggtgcaggactttgagaagcgcttcatgcag acgccggaggagcagagggaggccctgctggagcagcacaaaacccacacactgcagctc tacagctccctcaaggagaaggagtgggacgacagagtgagtgacgagcagtgtctgttg atcatgtcggtgcgtaagggaaagcgcctcatctccaggctcatccctttcctgcctccg ctgcaggccgccaccgttgtcatggggattgcccggaacctaccagccctggccaagaaa gacaaacaggaccaggtgctgtgctggttggtggagccaattgccgtagtgatctcatcc ctatctagcgcctccctcacagatttgctgcaggagctgcaaggcagcgagggtcaactg tccagagtgttacaaaataagtttggtgtgacactgctttacctgatcctgagtgaagga gagcgaatgcagagctccaaccccacctgtcaactcatggatgacaatcgatggacagag ttggtgttctctgtgaccagggagctgctcaacgtgccctcctcgtccctgtcccctcct ctcttcacccctcccaacctgctctctctcttctcgcgctacgtcgaccgacagaggctg gagctgctgcaggagaagttacagatctctgcattgtccaggtag

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