Oncorhynchus kisutch (coho salmon): 109894260
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Entry
109894260 CDS
T09179
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109894260
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109894260
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
109894260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_Prp19
WD40
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
KNTC1_N
PEP5_VPS11_N
Synaptobrevin
WD40_like
CFAP43_N
RAB3GAP2_N
WDR54
Motif
Other DBs
NCBI-GeneID:
109894260
NCBI-ProteinID:
XP_020343192
Ensembl:
ENSOKIG00005003369
LinkDB
All DBs
Position
LG7:17751053..17794192
Genome browser
AA seq
1188 aa
AA seq
DB search
MKKFNIRKVLDGLAASSFSSASPQPGTSQNDVIQETLQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAVGTQSGAVRLFGRAGVECYCQHESGAAVIQLQFLVNEGALVSALADDSVHL
WNLRQKQPAILHTLKFNRERITFCHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMWN
KAIELSSKSHPGPVVHISDNPIDEGKILIGFECGTVVLWDLKCKKADYRYSYDEAIHSVA
WHHEGKQFTCSHSDGTLTTWNVRVPAKPTITITPHGKQPKDGKKPEPCKPILKVEYKTTR
AGDAFVVMSGGLSYDTGCRRACLTVMHGKSTALLEMNYPIVDFLTLCETPYPNDFQDPYA
VVVLLEKDLVVIDLRQIGYPIFENPYSLSIHKSPVTCVEYFADCPPELIPALYSVGSWQK
RPGYSKKEWPISGGNWGQGTLSYPEIIVTGHADGSIKFWDASAIMLQVLYKLKTAKVFEK
ALKDGKEEKPSTEIVDEDPYAIQTLSWCPESRMLCVTGVSAHVIIYRFSKQEITTEVVQL
LEVRMQCELDDVDSPDTAGEHPLTPSTPVHSSCPTQEGEPPETQPSTTDDGPRDNVPCLK
VRSSPLKQSPGYQVELVIQLVWVSGEPPQQITSLAVNSSYGLVVFGNSNGLAVVDYLQKT
LVLNMGTSELYSPSDLYQRQPRSPRKKPQPSGALSDNNNGNNALEEKSNKSPTSVGSTST
TNSDDEHKQERFIQKVKSKSRRFSKTVANDFAKMSRKICSPTEQKTDLEKRVRRQRSLPY
KKRFCCVKEGKEPRKSLSQQRTLSVPYLNAKDSLFSRSRSSSVTSIELESREAISSFHFS
ESFPRKTDSSGSPSLWVGTTQGTVLVLSLSLPPTGDLRLQQPVRVSSCGTLVRLKGGILT
MAFLDSLGVVLPPSYEPWSEPNPPDDEEKEKARRRRLASPPTTQEGQDSQYAVVCSEKQA
KVVGLPSQSCFFKHNITESSFVLRADVVQMAAGLCLACFCANGHIMALSLPSLRPLLDVN
YLPLTDMRIARTFCFSNLGQAMYLTSPTEIQRITYSQETCDNLQEMMGELFTPIETPEAP
NRGFFKGLFGGGAQSLDREDLFGETAAGKASRSLAQHIPGPQGMEGMKGAASGVVGDLAR
ARIALDERGQKLGELEDRTAAMMASADSFSKHAHDMMLKYKDKKWYQL
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaatattagaaaagtgctggacggcttggctgcttcttcattttcctct
gcatctccacaaccgggaactagtcaaaacgatgtgatccaagagacactacagtcggag
cattttcagctctgcaagactgtgcgccatggcttcccttaccaaccctcctccatggcc
tttgaccctgtgcagaagattctggctgtcgggactcagagcggagctgtgagacttttt
ggccgtgcgggtgtggagtgttactgtcaacatgagagtggtgcagctgtcattcagctc
cagttcctggtcaacgagggggcgttagtcagtgccttagctgatgacagcgttcatctg
tggaacctgaggcagaagcagccagctatcctgcacactctcaaattcaacagggagagg
atcacgttttgtcacctgcccttccagagtaaatggctgtacattggcacagagaaagga
aacatccacatcgtcaacgttgagtccttcacactctcaggctacgttatcatgtggaac
aaagccatcgaactgtcctccaagtcacaccctgggcctgtggtccacatcagtgataac
cctatagacgagggaaagattttgattggatttgaatgtgggactgttgtgttgtgggac
ctgaaatgcaagaaagctgactaccgctacagttatgatgaggctatccactcggtagcc
tggcaccacgagggcaaacagttcacctgcagccactcagatggaactctgactacatgg
aacgtacgcgtccctgccaagcctacaatcaccatcacaccacacggtaagcagcccaag
gatggaaagaagccagaaccatgtaaacctatccttaaagtggagtacaaaacgacaaga
gctggggatgcctttgtggtcatgtctggaggcctgtcttatgacacagggtgcaggaga
gcctgtctgacggtgatgcatgggaagagtactgccctcctggagatgaactatcccatc
gtagacttcctcacgctctgcgaaacaccatatccaaatgatttccaggatccttatgcc
gtagttgtccttttggaaaaggatttagttgtcatcgaccttagacaaattggataccca
atatttgagaacccgtactctttgtcgatccacaagtctccagtgacgtgtgtagaatat
tttgctgactgccctcctgaacttatacctgcactttactctgttggctcctggcaaaag
agaccgggttacagtaagaaggaatggcccataagtggtggtaactggggccaaggcaca
ctaagctaccctgagatcatcgtcactggacatgctgatggctcaatcaagttttgggat
gcttctgcaataatgctccaagtactgtacaagctgaagactgccaaggtgtttgagaag
gctctaaaggacggtaaggaggagaagccgagcacggagatagtggatgaggatccctac
gccatccagaccttgtcgtggtgcccagagagcaggatgctgtgtgtgactggagtctct
gcccacgtcatcatctataggttcagcaaacaggaaataaccactgaggtggtgcagctg
ttggaggtgcgtatgcagtgtgagctggatgatgtggattctccagacaccgcaggagag
catcctctcaccccatctaccccagtgcactcctcctgcccaacccaggagggagaaccc
cctgagacccagccctccacaactgatgatgggccccgggataatgtaccatgcctcaag
gtccggagctcccctctgaagcagtctcctggttaccaggtggagctggtcattcagctg
gtctgggttagtggggagccgcctcagcagatcaccagcctggctgtcaactcctcatac
ggacttgtggtgtttggcaacagcaatggtctggctgtagtggactaccttcagaagacc
cttgtcctgaacatgggcacgtcagagctgtacagtccctcagacctctaccagagacag
cctcggtcgcctcgcaagaaaccacagccgtctggagctctcagtgataacaacaatgga
aacaacgctttagaagagaaaagcaacaaatcaccaacgtcagtaggctctacgtcaacc
accaattcagacgatgaacacaaacaggaaaggttcatacagaaggtgaagtccaaaagc
agacggttttccaagacggttgccaatgactttgccaagatgtcaaggaaaatttgctcg
cctacagagcaaaagacagacctggagaagagggtgcgacgccagcgctctctcccgtat
aagaagcgcttttgttgtgtgaaggagggcaaggagcccaggaagtctctctcccaacaa
aggactctctcagtcccttacctcaatgccaaggacagtttgttcagccgctcgaggagc
tccagtgtgaccagtatagagctggagtcccgcgaggccatctcctccttccacttcagt
gagagtttccccaggaagacagacagcagtggcagtcccagcctgtgggtgggcactacc
cagggcactgttctggttctgtccctaagcctgccacccacaggggacctgaggcttcag
caacctgtcagagtatcatcttgtggtactctggtcagacttaaaggaggtatcctgacc
atggctttccttgactcccttggggtggtcctccccccttcctacgagccgtggtcggag
cccaaccctccggacgacgaggagaaggagaaggcgaggcggcgcaggctggcctctcca
cccaccacccaggagggtcaggacagccagtatgctgtggtgtgttcagagaaacaggcc
aaagtggtgggcctaccctcccagtcctgcttcttcaaacacaacatcacagagagctcc
tttgtgctgagagctgacgtggtgcagatggctgctggactctgcctcgcctgcttctgt
gctaatggacacatcatggctctgagtctacccagtctcagaccactcctggatgtgaac
taccttcccctgacagacatgaggatagcccggaccttctgcttctccaacctgggccag
gccatgtacctcacctcccccaccgagatacagagaatcacatacagccaggagacctgc
gacaatctacaggaaatgatgggagagttgtttacaccgatagagacaccggaggctcct
aacagaggtttcttcaagggcctgtttgggggaggggctcagtccctggatagagaagac
ctgtttggtgagacggcggcgggaaaggcgtctcgtagcctggcgcagcacattcctggg
ccccagggcatggaaggcatgaagggggcagcctctggagtggttggagacctggcccgt
gcccggatagccctggacgagagggggcagaaactgggcgagctggaggacagaaccgca
gccatgatggccagcgctgactccttctctaaacacgctcatgatatgatgctgaagtac
aaagataagaagtggtatcagctttga
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