Oncorhynchus kisutch (coho salmon): 109894289
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Entry
109894289 CDS
T09179
Symbol
cdan1
Name
(RefSeq) codanin-1 isoform X2
KO
K19531
codanin-1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109894289 (cdan1)
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
109894289 (cdan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
Motif
Other DBs
NCBI-GeneID:
109894289
NCBI-ProteinID:
XP_020343268
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Position
LG7:19368792..19386844
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AA seq
1377 aa
AA seq
DB search
MAALLESLLQKEVEAIKAVEWLKHDGDSDSLAWCKPLKIERQEFVPFLLNFLREQSCSTL
THGPATPAKTPSHPRVSQPSQQGPGFSSEHRGGCRSTGPGTGPRSASRVQLFSSTPSLSP
GAEWDTSQPPSGSHCLGGISALSSPSFSSARSPAPASTSRHTPSERRSTQRASLGDFMPS
PPELQHHHSLSLGVQQQPRGRRRSAGMGRQGGGRGVFQTEEVGPGRSEGGGRKGRGGGAN
KMGDPAVSPPMAQMTTLVQLNLTNLEDFPPMGVSHASPALHTKPSRRINPTPVSAERPHS
RPKTCFTSTPFSTRPSSPPPVPEAVTGAIEGSITGTLNMGSPPLSLQEERELLKRVKCKR
AQQVGSPLPTSLDPCTPTKPGLRTVSGSKMTPVTLGSCPDPSKVTLTSELDLLADLYCTC
ISENLVPNVFLELFFVLQLLTSRTPAVTEEEDKDLSMGTLDVLERGYLSKVHNCVYFSVR
VLENQFELVSHLDKDTLRLLAENERVTCFSPSLRNRLTLAQDPSTAKVSPSVDTFIHSVP
FQPATDNRSNFSSDKAFHTFKKQRDIFYEVLREWEDFHKEPRWEFEAELGNRVRGMVSQL
NSTGNHSHFARLFLKQLVQMCKGPRALGSPGDTPDADLLGMLGADSLGRLKRLEERLIQP
QGILGPCPPPAFPGHQEFFRDFLKTASCCQLNQHLKDSLCQQLLQLDEVSVLAPVVSSTE
GEGDMEQQDEKQRFSSVLLLARLLAKFLGYISFLPYQTSERPSREIQEATANLRSKSMSV
LDVCAVLRSCVRRRRTILTVPWLVEFLSMLDFTGPFLLCYRTVLGLLLSLYRRMVLSREG
EVCYLNQLLMVAVLGWLFQIPVIPEELFFTTDFAVAVELEESQTNVQGLDCLPLVDQQLL
YTCCPFLGEFRKLLAAFVAGSSARGGGLIRKITPTSAELRGTPTTTRSQQKRQVDLEQAF
FHNQPPSLRRTVEFVAERVGSNCVKHMKVTLVCELVRGGERLLREGLISPGANPLILNDS
ICAQLCDGGQEALERATRFCSEKGPEAIRVLLPDETSPAVLTTSENITKRLATEKAYSWL
SSNITALVKREWKTKFDRVMKSLPSPEASGVEGSGLVAGAAAVSQEQSRNPKRDMGKEEA
VTSCPPDCPHSAPLPSDVLVEIKEVLSIAVGPRSEKEALTCLQLNALLGKVGDTLSCKKF
SFPMPEQMLIRCTVLLACKLVSGELPMVSPQEECGRTVSPGRTVSPDPVLPDSPVQRVGC
SIKVLLEQLILLWGRDCCSSAPLHLLFTEMTLSAVLMARDSQWDNFLFLVRQLVEQGILG
EEEVVSHWRKLSQLPWPTEFIEKIQQQSSSTTSLPMPELQNHMDMLQVSPQPVEGAN
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcttttggaatcgctgctgcagaaggaagtggaagctatcaaggccgtagaa
tggttaaaacacgacggggacagtgacagcttggcatggtgtaagccactgaagatcgaa
agacaggagtttgttcctttcctgttgaacttcctgcgagagcagagctgctccaccctc
acccatggccctgccacacccgccaagacccccagccaccccagggtctcccagccctct
cagcaggggccaggcttctccagtgagcatagggggggctgcagatctaccggacctgga
accggtcctcgtagtgccagccgtgtacagctattctcctccactccctccctgtctcct
ggggctgagtgggatactagccaacccccatctggctcccactgcctgggtgggatcagt
gccctcagtagtccttccttcagctcagccaggagccctgctccagcctccacctccagg
catactccctcagagcgccgctccacccagagagccagtttgggggatttcatgccgtca
cctccagagctccagcaccaccacagtctcagcctgggcgtccagcagcagccacgtggc
cgcaggaggagtgccgggatgggaaggcagggtggggggcgtggtgtgttccagactgag
gaggtggggccaggaagatctgagggtggtgggaggaagggaaggggaggaggggctaat
aaaatgggtgacccagctgtgtcgcctccaatggctcagatgacaacgctggtccagctc
aacttaaccaatctggaagacttcccacctatgggggtgtcgcatgcatcaccagcactg
catacaaaaccatctcggaggatcaacccaaccccagtcagtgcagagcggcctcactcc
agaccgaagacctgtttcacttccacccccttcagcaccaggccctccagccctccccca
gtcccagaggcagtcaccggggccatcgaagggagcatcactgggaccctgaacatgggc
agcccccctctcagtctgcaggaggagagagaactgctaaagagagtgaagtgtaaacga
gcccagcaggtgggctcccctctacccacctctttggacccctgtacccctaccaaacca
gggctccggacagtatcgggctccaaaatgacccctgtcaccctggggtcgtgtcctgac
ccctctaaagtcaccttgacctctgaactggaccttctggctgacctctactgtacctgc
atctctgagaacctagttcccaacgtgttcctggagctgttctttgtgctgcagcttctg
acatctagaacaccagccgtcacagaggaagaggacaaggatctaagtatggggacgtta
gatgtcctggaaagaggctacctcagcaaggtgcacaactgtgtctacttctctgtcagg
gtgctggagaatcagtttgagttggtgtctcacctggacaaagacaccctgcgtctcttg
gctgagaacgagagggtgacctgcttctctccgtccctgaggaacagactgactctggcc
caggaccccagcacagccaaggtctcgccctctgtggacaccttcatccactctgtcccg
ttccagcctgccactgacaaccgctccaacttcagcagtgacaaggccttccacaccttc
aagaagcagagggatattttctacgaggtgctgcgagagtgggaagacttccacaaggaa
cctagatgggagtttgaagctgaactaggcaatagggtcagaggaatggtgagtcaactg
aactccactggaaaccactcccattttgccagactcttcctcaagcagttggtgcagatg
tgcaaaggtccccgtgctctgggctccccgggcgacacccccgacgcggacctgctaggc
atgctgggagcagacagcctggggcgtctaaagcgtctggaggagcgtctgatccagccc
caaggcattctgggaccctgtcctccacccgccttcccgggacaccaggagttcttcagg
gacttcttaaagaccgcaagctgctgccagctgaaccagcacctgaaggacagtctgtgt
cagcagctcctccagcttgacgaggtgtcggtcctggctcccgtggtctccagtaccgag
ggagagggagacatggaacaacaagatgagaagcagcgtttctcctctgtcctgctgttg
gctcgtctcctagctaagttcctgggttatatctccttcctgccataccagacctctgag
aggccctccagggagatacaggaggctactgccaacctccgcagcaagagtatgtctgtg
ctggatgtgtgtgcggtcctgcgtagctgtgttcgtaggagacggaccatccttactgtg
ccctggctggtggagttcctctccatgctggacttcaccggtcccttcctcctctgctac
aggaccgttctgggactgctgctcagcctatacaggcgtatggtgctgtccagagaagga
gaggtgtgttacctgaatcagcttctcatggtggctgttctaggctggctgttccagatc
ccagtgatcccggaggagcttttcttcactactgatttcgctgtagctgtcgagctagag
gagagccagaccaacgtccagggacttgactgtctccccctggtggaccaacagctcctc
tacacctgctgtcctttcctgggtgagttccgtaagctcctcgctgcctttgtggccggt
agctctgccaggggtggaggcctcatccgtaagatcacccctacctctgctgagctgaga
ggtacccccaccaccaccaggtcacagcaaaaacgacaggtggatttggagcaagccttc
ttccataaccagcctccatctctcagacgaacggtggagtttgtagctgagagggtggga
tccaactgtgtcaaacatatgaaggtcacgctggtgtgtgagctggtccgtggtggagag
aggttgctgagggaggggctgatctcaccaggggccaaccctctgatactcaacgactcc
atctgtgctcagctctgtgacgggggccaggaggctctggagagagctaccaggttttgc
agtgagaagggtccagaagccatccgggttcttcttcctgacgagacgtctcccgctgtt
ctcactacgtctgagaacatcaccaagcgcctggccactgagaaggcctatagctggctc
tcctccaacatcacagccctggtcaagcgagagtggaaaacaaagtttgaccgtgtgatg
aagtctcttcccagcccagaggctagtggtgtggaaggttctggtcttgtggctggagct
gcagcagtctcccaggagcagtcacgtaacccaaaacgggacatgggcaaggaggaggct
gtgacgtcctgccctccagactgcccccacagtgcaccactaccatctgatgtcctggta
gagattaaggaggtgttgagtattgcagtaggcccgaggtctgaaaaggaggcgttgact
tgtcttcagctgaacgctctactgggcaaagtaggagacacactgagctgcaaaaagttc
tcattcccaatgcctgaacagatgctgatacgttgcaccgtcctactagcctgtaaacta
gtttcaggggagctgcccatggtgtccccacaggaggaatgtggtaggacagtgtctcct
ggtaggacagtgtctcctgatccagtactaccagactcaccagtccaaagggtaggctgt
tcaatcaaagtcctgctggagcagttgatcctcctgtgggggagagactgttgttcatca
gcccccctccacctgctcttcacagaaatgacactcagtgctgtcctcatggccagagac
tcacagtgggacaacttcctgttcttggtcagacagctggtagagcaggggattctggga
gaggaagaagtggtctctcattggaggaaactgtcacagttaccctggccaacggaattc
atagagaagatccagcagcagtcctcttccaccacatcccttcctatgcctgagcttcag
aaccacatggacatgttgcaggtctcaccacaacctgtagagggagccaactaa
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