Oncorhynchus kisutch (coho salmon): 109894290
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Entry
109894290 CDS
T09179
Name
(RefSeq) spectrin beta chain, erythrocytic isoform X2
KO
K27409
spectrin beta, erythrocytic
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109894290
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109894290
Intermediate filaments
Intermediate filament-binding proteins
109894290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
DUF4600
Ribonuc_L-PSP
Motif
Other DBs
NCBI-GeneID:
109894290
NCBI-ProteinID:
XP_020343269
Ensembl:
ENSOKIG00005020764
LinkDB
All DBs
Position
LG7:19443023..19503203
Genome browser
AA seq
2369 aa
AA seq
DB search
MTSTTDFDNVEITQQYSRINTRFELLEEELDNDKSSVRLFERSRIKTLTDEREAVQKKTF
TKWVNSILSRVNCRIVDLYLDLRDGRMLIKLLEVLSEEKLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDIVVEMGQADGTQRESRTAK
DALLLWCQMKTAGYPNVNITNFTTSWKDGIAFNALIHKHRPDLVDYGGLKKSNPTHNLQN
AFNVAEQKLGVTKLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKALAVEGKRVGKVLDH
AIETEKMIDKYETLSSDLLMWIEQTIIVLNNRKLANSLTGVQQQLQAFNSYRTVEKPPKF
QEKGHLEMLLFTIQSRMRANNQRVYTPKDGALVADINRAWEHLEREEHERERVLRDELIR
QEKLEQMARRFDRKAAMRETWLLENQRLVAQDNFGYDLPAVEAAKKKHDAIETDIAAYEE
RIQGIVAISEELQSELYHDTKRIDVRKENILRLRDYLLELLNARRARLDKNLTLHRIFQE
MLYIINWIDEMKARLLSPDFGKHLLEVEDLLQKHALVEADIAVQAERVHNANAAALKFAN
GDSYKPCDPQVIKDRVQHLDLCYQELCALAAQRRARLEQSRRLWNFFWEMAELESWIKEK
EHIFSSLDYGKDLTSVLTLQSKHSAFEDELGARRVHLREIMDEGDKIIQAGHFDTPQVGD
RMEDVKRQWQQLEELAAFRRQNLQDTQRFFQFQGEADDLKAWLLDAKRQMTSDEVGHDEY
TTQRLLKRHRGLRDDVAKNGATIDALTKQAAALPEELRNTPDIQRRLTEIRDLYMELMSL
CDLRQKKLDDAMALYIIFSETDACELWMGEKETWLVGLDVPEKLEDLEVVQNRLSILSSD
MANIQSRVDDVNKAVKQLEDSRHPRTKEVKECQTRLNKRWEAFKAMFEERKRKVDSALSY
HNYGLECDETESWIRDKTRVIESTQELGNDLNAVMTIQRKLYGMERDLAAIGDKLTFLRS
EADQLAKDHPDNAADILARRAELDAAWDNLKATLKDREESLGEVSKLQNFLQDMDDFQSW
LFKTQKAVASEDMPETLPQAEQLLSLHDAVHDDMGTHEEDYYKVRDMGVAVTQGQLDDPQ
YQELDKRLKGLDRGWDELHKMWDSRKGFLDQGLGFQQFMRDAKQVETILNNQEYTLAHTD
KPDTLDGAEQALKRHEDFVCTMDTNIEKIASMLEGGQKLVDRGNLYSPRVQDKMDLIHDR
YHKNRDKANEVTGVLKDNRDLQHFLQNTQDLTLWINEKMLTAQDVSYDGDRNIHTKWKKH
QAFMAELSSNKDWLNKIDQEGQELMDAKPEFEPIVTERLAKLHELWDKLESTAEDKARLL
FDANRSELFDQSQADIKKWLAELQKELQGDEEVKDLTNANILLKKHQQTENQVRDRAREL
EELQKAVEKHGGLAGSREDQLETEQQAIQMDFQQLLNPLSQRRGKLEAAKSVHQFYRDLA
DEILWVEERLPLAMSDEHGNNLQAVQMLLKKNQTLQREMEGHQPRVDEVLERGRRMTSAA
TEAGGPEAERIGQQVEELEEVWSRLQDEMAKRRDRLNGSNLAQQYFNDADEAEAWIGEEE
LYMITDEKAKDERGAMLMLKRHLIMKEAVDDYSDAIQKLADRAQKMLNEDHPDGESVIRR
QGQVDKQYAGLKDLAEDRRRNLDHAYHHFLLSREVEDLEHLIAERDVVASSQEMGQDLDH
VTLLRDKFRDFARETGTVGQERVDYVNQTIDELIEAGHTEASAMAEWKDSVNESWADLLE
LIDTRAQLLQASYDLLKYFDDGKELVAQIQEKHNEIPADLGEDFSKADTFHRMHAAFERD
ISALGKQVQQFQETAVRLHAQYAGDQAVEIQTQEKEVVEAWKALLDACDGRRRRLEETAD
KFRFFTMVRDLMAWMESTIQQIETQEKPRDVSSVELLMKYHQGIMSEINQRGPKFSECEE
HGKALLARKHKDSVEISIKLSQQREKRKEMMIKWEDRWDWLRLLLEVCQFARDASVAESW
LVAQEPYVASKDLGQTVDEVEKLLKRHEAFEKSTATWEERFSALERLTTLELLELRKQQQ
EMQQIVTEEQQRSQMESRREDTGFAEDSSQLYTIEEQTLPASGEVVEASSGQLEGTAGDS
TMPLLSEMQEAGLQEASSLELLDASVSGQTLREGEIRATTLPAEPLSAKAVLQEGMLGRK
HDLEAAGKKTSNRSWNNLYCVLKPGQLSVYKDAKSISHGSTYHGEDPLSLGNASCEVLTN
YKKKKHVFKLRLGDGSEYLFQCKEKELDLWTQAMEKAVKPLAQEEVGPSGSAGARAHSLP
PPSSSTTPEPAKDKKDKEKKGFSRFTKKK
NT seq
7110 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaccacggacttcgacaacgtggagatcactcagcagtatagccgcatcaac
acgcgcttcgagctgctggaagaggagctggacaatgacaagagctctgtacgactgttt
gagaggtcacgcatcaaaaccctaacagatgagcgcgaggcggtccagaagaagaccttc
actaagtgggtcaactccatcctgtcgcgggtcaactgccgtatcgttgacctgtacctg
gacctcagggatggacgcatgctcatcaaactactggaggtcctctctgaagagaaactg
cccaagcccactaagggccgtatgcgtatccactgcctggagaacgtggacaaggccctg
cagttcctcaaggagcagagggtccatctggagaacatgggatcacacgacattgtcgac
ggcaaccaccgcctcatcctgggactcatttggaccatcatcctcagattccagatccaa
gacattgtggtggagatgggacaggcagacgggacccaacgggaaagccgcacagccaag
gacgctctgctactctggtgccagatgaagactgctggatatccgaatgtgaacatcacc
aacttcaccaccagttggaaagatggcattgcgttcaatgctctcatacacaaacacagg
ccagacctggtggactatggtggcctgaagaagtccaacccaacccataacctccagaat
gccttcaacgtagcagagcagaagcttggcgtgaccaaactgttagaccccgaagatgtg
ttcacggagaacccagatgagaagtccatcatcacatatgttgtagcattctaccactac
ttctccaagatgaaggcactagcagtggaggggaagagagttggcaaggtgctagaccat
gccatagagacagagaagatgattgacaagtacgagaccctatcgtcagacctgctgatg
tggatagagcagaccatcatcgtcctgaacaaccgtaaactggccaactctctaactggt
gtccagcagcagctccaagctttcaactcctaccgcaccgtggagaaaccacccaagttc
caggagaaaggtcaccttgagatgctgctgttcacaatccagagccgtatgagagccaac
aaccagagggtttacacccccaaggacggggctctagtggctgatatcaacagggcctgg
gagcacctagaacgcgaggagcatgagagggagcgtgtcctgagagacgagctgattcgc
caggagaagctggagcagatggccagacgctttgacaggaaagcggccatgagagagacc
tggctactggagaaccagagactggtggcacaggacaactttggctacgacctgccggcg
gtggaagcggcgaagaagaagcacgacgccatcgagacagacatcgctgcctacgaggaa
cgcatccagggcatagtggctatctcggaagagctgcagtctgagctctaccatgacacc
aagcgcatcgacgtgcgcaaggaaaacatcctgaggctacgggattacctactggaacta
ttgaatgctcgcagggcacgcctggacaagaacctcaccctgcacaggatcttccaagag
atgttgtacattatcaactggatcgatgagatgaaggctcggctcctgtctcctgacttt
gggaagcacctgttggaggtggaggacctgctccagaagcatgctctggtggaggctgac
attgcagtgcaggcagagagagttcacaacgccaatgcagctgctctcaagtttgccaat
ggagacagctacaagccctgtgacccccaggtgattaaggaccgggtgcaacacctagac
ctgtgttaccaggagctgtgtgccctggcagcccagcgccgtgcccgactggagcagtcc
cgacgcctctggaacttcttctgggagatggccgagctggagagctggatcaaggagaag
gagcacatcttctcctcgctggactacggcaaggacctgaccagtgtgctgactctgcag
agcaaacacagtgccttcgaggacgagctgggggcccgccgtgtccacttgcgggagatc
atggacgaaggagacaagataatccaggctggacacttcgacacaccacaagtcggggat
cgcatggaggacgtgaagaggcagtggcagcagctggaggagctggcagcgttcagaagg
cagaacctccaggacacccagaggttctttcagttccagggagaggctgatgacctgaag
gcctggctgctggatgccaagaggcagatgaccagtgatgaagtgggtcatgatgagtat
accacccagaggctgctgaagagacacagaggcctaagggacgacgtggccaagaacgga
gccaccattgacgctctgaccaaacaggcggcggcgctacccgaggagctgcgtaacacg
ccagacatccagagacgtctgacggaaatcagagacctgtacatggagctgatgtccctg
tgcgacctgcgacagaagaagctggatgatgctatggccctgtacatcatcttcagcgag
acagacgcctgtgagctgtggatgggcgagaaggagacctggctggtagggctggatgtg
cctgagaaactagaggatttggaggtggtgcagaacaggttgagtatactttcttcagac
atggctaacatccagtcacgggttgatgatgtcaacaaagcagtaaagcagcttgaggac
agcaggcaccctcgtaccaaagaggtgaaggaatgccagacgagactgaataagaggtgg
gaggccttcaaggccatgtttgaggagaggaagcggaaggtggactctgctctcagctac
cacaactatggcctggagtgtgacgagacagagtcctggattcgagacaaaacccgggtc
atcgaatccacccaggaactgggcaatgatctgaacgctgtcatgaccatccagaggaaa
ctctatggcatggagcgcgacctggccgccatcggagacaagctcaccttcctgcggagt
gaggcggaccagttggccaaggatcacccggacaacgctgcagacatcctggctagacga
gccgagctggacgcagcctgggataacctgaaggccaccctgaaggaccgggaggagtct
ctgggagaggtgtccaagctgcagaacttcctacaggacatggatgacttccagtcctgg
ctcttcaagacccagaaggccgtggcgtccgaggacatgcctgagactctgccccaggca
gagcagctgctgagtctccatgacgccgtgcatgatgacatgggcacacacgaggaggac
tactacaaggtgagggacatgggcgtggcggtgacccagggccagctggatgaccctcaa
taccaggagttggacaagaggctgaagggtctggaccgcggctgggacgagctccacaag
atgtgggacagtaggaagggcttcctggaccagggcctgggattccagcagttcatgagg
gatgccaagcaggtggagaccatcctcaacaaccaggagtacactctggcccacacggac
aagcctgacaccctggacggagcagagcaggccctgaagagacacgaggacttcgtctgc
accatggacaccaacatagagaagatcgccagcatgctggaggggggacagaaattggtt
gacagggggaacctctactcccccagggtccaagataagatggacctaatccatgacagg
taccacaagaacagagacaaagccaacgaggtgacaggggtacttaaggataaccgtgat
cttcaacacttcctgcaaaacacacaggatctcactctgtggataaacgagaagatgttg
acggctcaggacgtgtcgtatgacggggacaggaacattcacaccaagtggaagaagcat
caggccttcatggctgagctgtcctccaacaaagactggctgaacaaaatagaccaggag
ggtcaggagctgatggatgccaaacctgagttcgagcccatcgtgacagagcgtctggcg
aagctgcacgagctgtgggacaagctggagtccactgccgaggacaaggcccgtctgttg
tttgatgctaaccgctccgagctgtttgaccagagtcaggccgacatcaagaagtggctg
gctgagctgcagaaggagctacagggagacgaggaggtcaaggacctcacaaatgccaac
atcctgctcaagaagcaccagcaaacagagaaccaggtgcgtgaccgtgcgcgggagttg
gaagagctccagaaggctgtcgagaagcacggaggcctagccgggagcagggaggaccag
cttgagactgagcagcaagctatccagatggacttccagcagctcctcaaccccctgtcc
cagcgcaggggcaagctggaggcagctaagtccgtgcaccagttctacagggacctggct
gatgagattctctgggtcgaggagagattgccccttgcgatgtcagatgaacacggcaac
aatctccaagcggtccaaatgctgttgaagaagaaccagacattacagagggagatggag
ggccaccagccccgggtggatgaggtgttggagcgtggccggaggatgacatcggccgcg
acagaggcgggcgggccggaggctgagcgtattggacagcaggtggaggagctggaggag
gtgtggtctcggctgcaggatgagatggctaagaggagagacaggctgaatggatctaac
ctggcccaacagtactttaatgacgctgatgaagctgaggcctggataggagaggaggag
ctatacatgatcactgatgagaaagccaaggatgagcggggagccatgttgatgttgaag
cgtcacctgatcatgaaggaggctgtagatgactactcagacgccatccagaagctggct
gaccgcgcacagaagatgctcaacgaggaccaccctgatggtgagtctgtcatccgtcgt
cagggccaggtagataagcagtacgctggtctgaaggacctggcagaggatcgcaggagg
aacctggaccatgcctatcatcacttcctgctgagccgagaggtggaggatctggagcac
ttgatcgctgagagggatgtggtggcctcatcccaggagatgggacaggatctggaccat
gtcacgctcctgagggacaagttccgtgactttgcccgggagacagggacggtggggcag
gagcgtgtggactatgtgaatcagaccatagacgaacttattgaggcgggacacacagag
gcttctgccatggccgagtggaaggacagcgtcaatgagagctgggctgacctgctggaa
ctcatagacacccgcgctcagctcctacaagcctcatatgacctgctcaagtactttgat
gatgggaaggagctggtggctcagatccaggagaaacataatgagattcctgctgacctg
ggagaagacttcagcaaggcagataccttccaccgcatgcacgccgccttcgagagggac
atcagcgccctgggaaaacaggtgcagcaattccaggagacagcggtccgtctgcatgcc
cagtacgctggggaccaggctgtggagatccagacccaggagaaggaggtggtggaggcc
tggaaagccttgctggatgcctgtgacggccgcaggagacgcctggaggagacagctgat
aagttccgcttcttcaccatggttcgagacctcatggcctggatggagagcaccatacaa
cagatagagacacaggagaaaccacgggacgtgtcatcagtagagctgctgatgaaatac
caccaagggattatgtcagagatcaaccagcgtggacccaagttctctgaatgtgaggag
cacggcaaagctctgctggctcgcaaacacaaagactctgttgagataagtattaagctg
agccagcagagggagaagaggaaggaaatgatgatcaagtgggaggaccggtgggattgg
ctcaggctcttgttggaggtgtgccagtttgcacgggatgcctcggtggcggaatcgtgg
ctagtggctcaggagccatacgtggccagcaaggacttgggacagacggtagacgaggtg
gagaaactgctgaagagacatgaagcctttgagaagtccaccgccacctgggaggagcgc
ttctcagcactggagagacttactacgttggagctgttggagttgaggaagcagcagcag
gagatgcagcagattgtaacagaggagcagcagcgctcacaaatggagagcaggagagaa
gacactgggtttgctgaggactcttctcagctctacaccattgaagagcagacactgcct
gcgtctggagaagtggtggaggcaagttcaggtcagttggaggggacagcaggtgactcc
acgatgcccctgctctctgagatgcaggaggctggcttgcaggaggcaagctctctggag
ctgctggatgcctctgtgtctggacagaccctcagggagggggagatcagggccactacc
ctgcccgctgaacccctcagtgctaaggctgttctgcaggagggcatgctgggacgcaaa
catgacctggaggctgctgggaagaagacttctaacaggtcctggaacaacctgtactgt
gtgctgaagcctggtcagctgtctgtctataaggacgccaagagcatcagccatggctcc
acctaccacggagaggaccctctgtcgctcggcaacgccagttgtgaagtcctgaccaac
tacaagaagaagaagcacgtattcaaactgaggcttggcgatggtagtgagtacttgttc
cagtgtaaagaaaaggagctggatctttggacccaggcgatggagaaggcagtgaagcct
ctggcgcaggaagaggtaggaccctcagggtccgcaggggcccgggcacacagcttgccc
cctccttcctcctccaccaccccagagccagcgaaagacaagaaagacaaggagaagaag
ggattcagtcggttcacaaagaagaagtga
DBGET
integrated database retrieval system
