Oncorhynchus kisutch (coho salmon): 109894578
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Entry
109894578 CDS
T09179
Name
(RefSeq) pre-mRNA-splicing factor syf2 isoform X1
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109894578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109894578
Spliceosome [BR:
oki03041
]
Complex B
Other components
Prp19-related factors
109894578
Complex C
109894578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
109894578
NCBI-ProteinID:
XP_020343757
Ensembl:
ENSOKIG00005022053
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All DBs
Position
LG7:complement(36774948..36782165)
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AA seq
239 aa
AA seq
DB search
MISFNNEKVSASVSDEQTESAASQKREERLRKFRELHFKRNEARNLNHKEVVEEDKRLKL
PTNWEAKKARLEWELMTDEKKKECAAKGEDYDRVKLLEISAEDAERWERKKKKKNPDPGF
SGYAEAQLRQYQRLTKQIKPDMDGYERQREQCGEDFHPTSNSLIHGTHVPSKEGIDRMVE
DVEKQIEKRAKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgatatccttcaataatgaaaaggtatctgcgtcggtcagtgatgaacagaccgaaagt
gctgcatctcagaaaagagaggagagactgcgaaaattccgggaactgcatttcaaaagg
aatgaagcacgtaatctcaatcacaaggaggttgtggaggaggacaaaagactgaagcta
ccaactaactgggaagcaaagaaagcccgtctggagtgggaactaatgactgatgaaaag
aaaaaggagtgtgcggccaaaggggaggactatgaccgggtgaaactgctagagatcagt
gctgaggatgctgagcggtgggagagaaagaagaagaagaagaaccctgacccaggattc
tcaggttacgcggaggcccagctgcgacagtaccagcgcctcaccaaacagatcaaacca
gacatggacggctatgagaggcagcgagagcagtgtggtgaggacttccaccccacatcc
aacagcctgatccatgggacccacgtcccatccaaggagggcattgaccgcatggtggag
gatgtggagaaacagattgagaagcgggccaaatacagccggcgcagggcctataacgat
gacgcagacatcgactacatcaatgagaggaacgccaagttcaacaagaaggcagagcgg
ttctatggcaaatacacagccgagatcaagcagaatctggagagaggcacagctgtctaa
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