Oncorhynchus kisutch (coho salmon): 109894677
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Entry
109894677 CDS
T09179
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04020
Calcium signaling pathway
oki04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109894677 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109894677 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oki04030
]
109894677 (ptafr)
G protein-coupled receptors [BR:
oki04030
]
Rhodopsin family
Others
Platelet activating factor
109894677 (ptafr)
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srx
Bac_export_2
DUF3382
UPF0182
Motif
Other DBs
NCBI-GeneID:
109894677
NCBI-ProteinID:
XP_020343914
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Position
LG7:46219192..46224154
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AA seq
374 aa
AA seq
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MEMEEDMTVNTTVNLSTVGKITFLDSEFRYTLFPVFYGVVFVLGLIANSYVLFVLQRLRN
AKAMNEIRIYMANLTVADLLFVCALPFWIGYYHHRGDWRYGDFLCRVTGAFFFINTYCSI
LFLAAISVNRYWAITRPLDAASSDHWRRGVAITAVIWALTLSMSVPYLLETGIQVDDGNV
SRCFEGYHDKTDDEKRTVATTHLIIVGCFILVFFLVVICNLLIARALLTQSPTQTRGSSS
SQLRGVKGQALQMLCAVVGVFVVCFLPHHVVQGPWTLAVLDIKEGWGRMDWGQRTRQWLN
DAHQVTLMLMGLNCLLDPVVYCFATRKFRLYIKDNLKKVGRGKGCSETAITHISMVECKN
VSQRLHSEQQQLKV
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaagaggacatgacagtgaacacgacagtgaacttatccacagtcggtaaa
ataacctttctggactctgagttccgttacaccctcttcccagtgttttacggtgttgtg
ttcgtccttggtctgatagccaacagttacgtgctgtttgtgctgcagcgcctgcgcaac
gccaaggccatgaatgagatccgcatctacatggccaacctgactgttgccgacctcctc
ttcgtgtgcgccctccccttctggattggctactaccaccaccgcggtgactggcgctac
ggcgacttcctgtgccgcgtcaccggcgcgttcttcttcatcaacacctactgctccatc
ctcttcctcgccgccatcagcgtcaaccgttactgggccatcacgcgcccgctggatgcc
gcctcgtctgaccattggcgccgcggggtggccatcacggcggtcatctgggcgctcact
ctgtccatgtccgtgccgtacctcttggagacgggcatccaggtggacgacggcaatgtg
tcgcgctgcttcgagggctaccacgacaagactgacgacgagaagcggactgtggccacc
acccacctcatcatcgtggggtgcttcatcttggtcttcttcctcgtagtaatctgtaac
ctgctcatcgcccgtgccctgctcacccagtcccctacccagactcggggctccagttca
tcccagctccggggggtgaagggccaggccctgcagatgctgtgtgctgtggtgggggtg
tttgtggtgtgcttcctcccccaccacgtggtccagggcccctggactctggctgtactg
gatatcaaggaaggctggggcagaatggactggggccagcggaccaggcagtggcttaac
gacgcccaccaggtcaccttgatgctgatggggctcaactgcctcctggatcctgtggtg
tactgcttcgccaccaggaagttccgcctgtacatcaaggacaatctgaaaaaggtgggg
aggggcaaaggatgctcggaaacagccatcacacacatttctatggtggagtgcaagaat
gtgagccagcggctccatagcgaacagcagcagctgaaggtttaa
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