Oncorhynchus kisutch (coho salmon): 109894697
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Entry
109894697 CDS
T09179
Name
(RefSeq) LIM domain and actin-binding protein 1 isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109894697
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
109894697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
DUF1202
Motif
Other DBs
NCBI-GeneID:
109894697
NCBI-ProteinID:
XP_020343958
Ensembl:
ENSOKIG00005003410
LinkDB
All DBs
Position
LG1:38190546..38218896
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AA seq
737 aa
AA seq
DB search
MHILLGAHEDEKLIAEAEMEGGSSFSRKSWASQSLRVTARELSLVSTRGKTNAIAERFSK
YQRAAEEANAEKKKASVESLPPTLRSGNLSVLKKRWEQPAPRQDKPSLLPAGPPRARLIP
PAVPKPVPPTEHRPPAKSPGSPGTQDSQDSIQYPSAAIAKEGAERRMERKDQRPSEGEEE
EGLMQVEDKVAPPSPCSPVEKPSVPLNSLKMMFEKGEGAKRRVSTGLHSSSSEDMDQRIG
VLSPDRVLETTSLKERMAKYQSAVTKKGPLARTASQSEGEDGSLKENVPPSGVAVSQALE
SYSRKVAVEETNGDGMDTPTSKDSTSSPSSAHSDPPKAARKFCLPVRETCIACLKTVYPL
ERLVANTQIFHTSCFRCLHCNTKLSLGNYASLHGNVYCKPHFSQLFKAKGNYDEGFGHRP
HKELWTPRAEGEEEEEEGVDREVEKKPKEQSERVAVVSRPASSDKQPSPTVEESPLAKVT
DLTASLETRSHTTSTEKLSSAEKVPEARKLRVAWPPPADSDAGTSQILEAGSGVSRPWRA
KWPPEGEVSSSTLSHDRSELKSLRRSSSLKERSRPFSVAPSLTTNALGPREPRRPLKSLL
DRRGSLEDSHSMPKEPEPNPQREREVRQEDKKECKPAPHSGSVVNGETSSEEEVESLPAA
QEERGKEIEGASLKCQSASPDIPASPSPSPQPKHNRSSQDVGFWEGEEEGGEGEQLTVEE
MIKRNRYYEEEEEEDDV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcacatacttttaggagcgcacgaagacgaaaaactcattgctgaggcggagatggaa
ggcggaagttcgttcagcagaaagtcgtgggcgtcgcagtctttacgggtcaccgccagg
gagctctcattggtcagcacgcgaggcaagaccaacgccattgcagagcgcttctccaag
taccagagagctgctgaggaggccaatgctgagaagaagaaagcatcggtggagagcctg
cctcccactctgcgttcagggaacctgagtgttctgaagaagcgctgggagcagccggca
cctcgccaagacaaaccctccctgctaccagccggcccaccccgcgcccgccttatcccc
ccagctgtacccaaaccagtgccaccgactgagcaccgccccccagccaaatccccagga
tccccgggcactcaggatagtcaagacagtatccagtatccttcagcagctatagccaag
gaaggagcggagagaaggatggagagaaaagatcagcggccaagtgagggagaggaggag
gaagggctgatgcaggtggaagataaggtagcgccacccagcccctgcagccccgttgag
aaacccagcgtgcctctcaacagcctgaagatgatgtttgagaagggagagggcgccaag
agaagggtgagcacgggactacacagcagctcctccgaggacatggaccagagaatagga
gtgttatcccctgaccgagttctggagaccacctccctgaaggaaagaatggccaagtac
cagtcagccgttaccaaaaagggcccactagcacgcactgccagtcagtcagagggagag
gacggcagcctcaaggagaatgtgccccctagtggtgtggctgtgagccaggctttagag
tcctacagcagaaaagttgctgtagaagagaccaatggtgatggcatggacacacctacc
tctaaggatagtacctcttctccatcctcagcccacagtgacccgcccaaggcagccagg
aagttctgcctgcccgtgagggagacgtgcattgcatgcctgaagacggtgtacccgttg
gagaggctggtggctaacacccagatcttccacacctcctgcttccgctgtctgcactgc
aacaccaagctcagtctgggaaactacgcctctctgcacggcaatgtctactgcaagccc
cacttcagccagctgttcaaggccaaaggcaactacgacgaaggcttcggccaccggccc
cacaaggaactgtggacaccccgtgccgagggagaggaggaggaggaagagggagtagac
cgagaggtggagaagaagccaaaggagcagtcagaaagagtggcggtggtgtcccgtcca
gcctcgtcagacaagcagcccagccccacagtggaggagtctcccctggccaaggtgacg
gacctgactgcctctctggagacacgcagccacaccacctccactgagaaactctccagc
gccgagaaagtcccagaggcccgcaagctgagggttgcctggccccctcctgctgacagt
gatgctggtacctctcaaattctggaggctggtagtggtgtgagccggccctggagagcc
aagtggcccccagagggcgaggtgtcatcgtccaccctgagccacgacaggtccgagctg
aagagcctgaggaggagctcgtctctgaaggagcgaagtcggcctttctcggtggccccc
agcctcaccaccaatgccctcgggccacgagagccccgccggcccctcaaatccctgctg
gataggagggggtcactggaggacagccactccatgcctaaggaaccagaacccaacccc
cagagggagagggaggtaaggcaggaggacaaaaaggagtgcaagcccgccccgcacagt
ggcagtgtggtgaatggagagaccagctccgaggaggaggtagagagtctgccggcggca
caggaggagagaggaaaggaaatagaaggggcttctctgaaatgccaaagtgcctctccg
gatatcccagcatctccctctccgtccccgcagcccaaacacaaccgcagctcccaggac
gtgggcttctgggagggcgaagaggaggggggcgagggggagcagctcaccgtagaggag
atgatcaagaggaaccgctactatgaggaagaggaggaggaagatgatgtctga
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