Oncorhynchus kisutch (coho salmon): 109894728
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Entry
109894728 CDS
T09179
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109894728
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109894728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109894728
Spliceosome [BR:
oki03041
]
Common components
Common spliceosomal components
SR proteins
109894728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
109894728
NCBI-ProteinID:
XP_020344016
Ensembl:
ENSOKIG00005014590
UniProt:
A0A8C7FX20
LinkDB
All DBs
Position
LG7:52656422..52664418
Genome browser
AA seq
312 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREVNLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGGGGGGGGGGRFSPRFSSYRQGSGGHSGGSSRYGPP
VRTEHRIIVENLSSRISWQDLKDLMRKAGEVTFVDAHRTNKNEGVVEFASHSDMKNAIDK
LDGTDLNGRKLKLSEDRKSRHSRSRSRGSRSYSRSRSRSPRSKSRSRSRNRSRSPRSRSA
SRTPEKKPSSAGGGRAAHRSTSRSPSRSRSPAPRSRTPPPRSRSRTPPPSSPAPARKQSQ
SRSRSPSVESQH
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgtgtgtttatcggccgtttgagcccccacgcccgtgagagagacgtg
gagaaattcttcaagggatatggacggatccgagaagtaaatttgaagaacggattcggc
tttgtggagtttgacgaccacagagatgcggatgatgccgtatatgagctgaatggcaag
gaactctgtagtgaaagggtgacgatagagcatgcccgctccagaagagggaggggtggt
ggaccagggatggggggtggtggtggaggaggaggaggaggacgcttctcacctcgtttc
agcagctaccgccagggctctggcggtcatagtggtggctccagtaggtatggtcccccg
gtgcgaacggagcacagaatcattgtggagaacctgtcgtcacggatcagttggcaggac
ctgaaagacctgatgaggaaagccggagaagtcacctttgtggatgcacacagaaccaac
aagaatgaaggggtggtggagttcgcatcacacagtgatatgaagaatgccattgataag
ctggacggaacggacttgaatggacgcaagttgaaactatctgaggatcgcaagagccgc
cacagcaggagtcgttcccgcggctctcgtagctactcccggtcccgtagccgttcccca
cgctccaagtcccgtagcaggagtcgtaaccgctccaggagcccccgatctcgctcggcc
agccgtaccccggagaagaagccttcctctgcaggagggggcagggctgcacatcgctcc
acctcacgctctccgtcccggtccagatcccctgcccctcgctcccgtacccctccccca
cgctcccgttctcgcactcctcctcccagttcccctgccccggcccggaagcagtctcag
tcccggtctcgctccccctcggttgagagccagcactga
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