Oncorhynchus kisutch (coho salmon): 109894763
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Entry
109894763 CDS
T09179
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki02010
ABC transporters
oki04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109894763
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109894763
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109894763
Transporters [BR:
oki02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109894763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
109894763
NCBI-ProteinID:
XP_031683963
Ensembl:
ENSOKIG00005002791
LinkDB
All DBs
Position
LG7:7863847..7904422
Genome browser
AA seq
2283 aa
AA seq
DB search
MAISTQLGLLLWKNFTYRRRQTLQLIIEIIWPLFIFFILISVRMHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRHPTPGESPGLVGNFNDSIISRLFIDAKKILLYSQNDK
SFEGYKVLVRALGKLQSNTAGFKLKDFLRDKETLSSFLHRNASLSHHAVQQIVEADLNLE
KVLIGGFGVHLRDMCNTTSLEEFVTISDKNVSRLTQDIICKASPDWLNKAQDHFLSNLDF
MKPIRKDVKSDPEVVQKVSAATDGLLESLGALAVELASMKSWKEMRNEILYLTVNATGSP
SHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNRGGNGSDDEPVSAYDNTSTPY
CNSMMRSLEASPVSRMIWRALKPLLMGKILYTPDTPATQRIIHEMNKTFQELGILRDLGG
MWEEMRPKIWTFMESSEEMNLVRTLLQNNASARFFNDRLAGTEWKVEDVSRFLSKAAEDK
RPAGSAYTWREVFGETDDAIKTISRFMECVNLDKLEPVANEERLVNKSMGLLDNQKFWAG
IVFPDIARSNSSDLPGNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFS
YLQDVIEQGIIRAVTGSQEKTGVYIQQMPYPCYVDDMFLRVMSRSMPLFMTLAWMYSVAL
IIKGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISASLLVVILKMGNLLPYSD
PCVVFLFLASFAVVTIMQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFG
AKVIVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPLEEDSYSLTTSICLMLFDSFL
YGVMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKQGKNIQERKEGNAEAVCIEEEPSHI
EPGVYIKNLVKVYSHGNKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSG
TAYILGKDIRSELSAIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKAEMEQI
VNDIGLPHKRQCRSNTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLL
KYRAGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDFD
LTLSSCRNSSSSSSVSYSKKVGLPQPQPQALTVLKEDSVSESSSDAGLGSEPESEATTID
VTMISNVIFKHVPAARLVEDLGHELTYVLPYKAAKGGAFVELFHEIDDRLSDLGISSYGI
SDTTLEEIFLKVAEDSGVDVAELPNSDGTIPARRHRRHAFGDHQSCLKPFNEDDAFDFND
SEGDPESRETDWLGGSDGKGSYQVKGWRLIRQQFVALIWKRFLYARRSRKGFFAQIVLPA
VFVCIALVFSLIVPPFGKYPSLELEPGMYEEQFTFISNDAPEDADTNKLLGALTNYDGFG
SRCNSPHAPCNTLNDEWVVPEVPESVRDIFMNGNWSMENPSPLCECSCEGRKKMLPECPA
GAGGLPPPQVKISDQGTLQNLTGRNISDYLVKTYAQIIGKSLKNKISVNEFRYGGFSLGA
RNTQLLPPGDDIDQAISEIRRRFHLERGTAADRFLASLSSFIQGLDTKNNVKIWFNNKGW
HSIGSFLNVMNNGILRASLPAGQDPSKYGIQAFNHPLNLTKEQLSQVALMTTSVDVLVSI
CVIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPFLYWLSNFIWDMCNYIVPATLVII
IFICFQQDAYVSSTNLPVLALLLLFYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGI
NGSVSTFVLELFGSNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENR
FRSPLAWDMVGKNLFAMAVQGVVFFTITVLIQYRFCIKARSMSTDQKPIGEEDEDVARER
QRILGGGGQSDILELKQLTKVYNRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKML
TGDSIVTSGEAYLAGKSVLTEINEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEK
EVCEVAEWGIRKLGLIKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKA
RRALWNCILSIVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGY
TIILRVAGPDPDLRPVMEFIEKELPGSTLKEKHRNMLQYQLSSSKTSLARIFSILAKNKE
WLHIEDYSVSQTTLDQVFVNFAKDQSDEDHLKDISMHKRDAVAVDITQLKSFLTDEKARE
SCV
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atggccatctctactcaactgggcttactgctgtggaagaacttcacctacagacggaga
cagacactccagctaattatcgagataatatggccgctcttcatcttcttcatcctcata
tctgtgaggatgcattacccgccctacgagcaacatgagtgccatttccccaacaaggcc
atgccctcggcgggcaccttgccctgggtacaagggatcatctgtaacgccaacaacccc
tgcttccgccaccccacaccaggagagagcccagggctggtgggcaacttcaacgattct
ataatctcccgtctgttcatcgatgccaagaagatcctcctctacagccagaatgacaag
agctttgagggctacaaagttctggtgcgggctctggggaaactacagagcaacacggca
ggtttcaagctgaaggactttctccgtgataaggagaccttatcgtcgttcctgcatcgc
aacgcctccctatcccatcacgccgtccagcagattgtcgaggctgacctcaacctagag
aaggtcctgattggaggtttcggcgtccatcttagagatatgtgtaacaccacttctctg
gaggagtttgtgaccatctccgacaagaatgtgtcacggctcactcaagacatcatctgc
aaggcctcccctgattggctgaacaaggcccaggaccacttcctgtccaacctggacttc
atgaaacccatacggaaggacgtgaagtccgaccctgaggtcgtccagaaggtatccgcg
gcaaccgacggtctgctggagagcttgggagcgctggctgtagagctggccagtatgaag
agttggaaggagatgcgtaacgagatcctttacctgacggtcaacgccacgggctccccc
agccacatgtaccaggccgtgtcccgtatcgtctgtggccaccccgagggcggcggactg
aagatcaagtcgctcaactggtacgaggacaacaactacaaggccctgttcggtaaccgt
ggcggcaacggcagcgacgacgaacccgtgtccgcctacgacaacacctcaactccgtac
tgtaacagcatgatgaggagtctggaagccagccccgtctccaggatgatctggagggcc
ctgaagcctctcctcatgggaaagatcctgtacacccccgacactcccgccacacagagg
atcatacacgagatgaacaagacgttccaggagctgggtatcctgagggacctgggtggg
atgtgggaggagatgaggcctaaaatctggaccttcatggagagcagtgaggagatgaac
ctggttcggacgctgcttcagaacaacgccagcgcccgcttcttcaacgaccgtctggct
ggcacagagtggaaggtggaggacgtgtcccgcttcctgtccaaggctgcggaggacaaa
cgccccgccggctcggcctacacctggagagaggtgttcggcgagaccgacgacgctatc
aagaccatctcccgctttatggagtgtgtgaacctggataaactagagccagtggccaat
gaggaaagactggtcaacaaatccatgggtctcctagacaaccagaagttctgggctggt
atagtgtttccggacatcgcccgtagcaacagttctgatctgccgggtaacgtcaactac
aagatccgcatggacatcgacaacgtggagcgcaccaacaagatcaaggacggttactgg
gaccctggtccccgggcggacccctttgaggacctgcgctacatctggggcggtttctcc
tacctgcaggacgttattgaacagggcatcatcagggcagtgacgggcagtcaagagaag
actggagtctacatccaacagatgccttacccctgctacgtggacgacatgttcctgcgg
gtgatgagtcgctccatgcctctcttcatgaccttggcctggatgtactctgtggccctc
atcatcaagggcgtggtctatgagaaggaggcgcggctcaaagagaccatgaggatcatg
ggattggacaacggcatcctgtggctcagctggttcatcagcagcctcatccccctgctc
atctccgcctcgctgctggtggtcattctcaagatggggaacctgcttccctacagcgac
ccttgcgtggtcttcctgttcctggcttcctttgctgtggtaaccatcatgcagtgcttc
ctcatcagtaccatcttctcccgtgccaacctggcggcggcctgtgggggaatcatctac
ttcaccctttacctgccctacgtcctctgtgtggcctggcaggactacgtgggcttcggg
gctaaagtcattgtgagcctgttgtccccggtggcgtttgggttcggctgtgagtacttt
gccctgtttgaggagcagggagtgggtatccagtggtccaacctgttgtccagccccttg
gaggaggacagctactccctcaccacctccatctgtctcatgctgtttgactccttcctc
tacggggtcatgacctggtacatcgaggctgtcttccctggccagtatgggatccccaga
ccctggtactttcccttcaccaagtcctactggtgtggagagaaacaagggaagaacata
caagaaagaaaggaaggaaacgcggaagctgtgtgcatcgaagaggagccgtctcacatc
gagcctggtgtttacatcaagaacctagtgaaggtgtatagccatggcaacaagttggct
gtagacgggttgaccctgggtttctacgaggggcagatcacctctttcctggggcacaac
ggagccggcaagaccaccaccatgtccatcctgacgggtctgttcccgcccacctctggc
accgcctacatcctgggcaaggacatccgctcggagctcagcgccatccgacagaacctg
ggcgtctgccctcagcacaacgttctcttcagcatgctgacggtggaggagcacatctgg
ttctatgcccgtctgaagggtctgtctgaggagaaggtgaaggctgagatggagcagatc
gtcaacgacatcggcctgcctcacaaacgccagtgtcgtagcaacacgctgtccgggggc
atgcagaggaaactgtcagtggcgttggcattcgttggagggtcaaaggttgtgatcctg
gatgaacccactgctggagtcgacccctacgcacgccggggaatttgggacctgcttctg
aagtatcgtgccggccgcaccatcatcctctcaactcaccacatggatgaggcggacatc
ttgggcgaccgcatcgccatcatctcccacggcaagctgtgctgcgtgggctcctccctg
ttcctgaagacccagctggggacgggctactacctgaccctggtgaagagagacttcgac
ctgaccctcagctcctgtcggaactcctccagcagcagctctgtctcctacagcaagaag
gtgggcctccctcaaccgcaaccccaggccctcacagtcctaaaggaggacagtgtttcc
gagagcagctctgacgctggactgggtagtgaacctgagagtgaagccaccactattgac
gtaaccatgatctccaatgtgatcttcaagcacgtccccgctgccaggctggttgaggac
ctgggccatgaactcacctacgttctgccctacaaggcggccaaaggtggagccttcgtg
gagctcttccacgagatcgacgaccgcctctctgacctcggcatctccagctacggcatc
tcagacaccactctggaagagattttcctgaaagtagcagaagacagtggagtggatgtt
gctgaacttcccaactctgatggcaccatcccggctcgtaggcaccgcagacatgcattc
ggagaccaccagagctgtctgaaacccttcaacgaggacgacgctttcgacttcaacgac
tctgaaggtgacccagaatctcgtgagacggactggctgggaggctcggatggtaaaggc
tcgtaccaggtcaaaggctggcgtctgattcgacagcagtttgtggcgttgatatggaaa
cgcttcctgtatgcccggcggtccaggaaaggcttcttcgctcagatcgtgcttcctgct
gtgtttgtgtgcatcgccctcgtcttcagtctcatcgtccctccgtttggaaagtacccc
agcctggagctggagcctggcatgtatgaagaacagttcaccttcatcagcaacgacgcc
cctgaggatgcagacacgaacaagctgttgggtgccctgacaaactacgatggctttggt
tcacgctgtaactcaccccatgctccttgcaacacgttgaatgatgagtgggttgttcct
gaggtaccggagagtgtgagggacatctttatgaatggcaactggagtatggaaaacccc
tctcctctctgtgagtgcagctgtgaaggacgcaagaagatgctacctgaatgcccagcg
ggagctggtggtcttcctcctccacaggtgaaaatcagtgaccaaggtaccctgcaaaat
ctgactggcagaaatatctcagattacctggtcaaaacctatgctcagattatcgggaaa
agtttgaagaacaaaatctcggtcaatgaattcagatatgggggattctcattgggcgct
aggaacactcagctcctcccaccaggtgatgatattgatcaggccatctctgagatcaga
cgacgcttccacctggaaagagggactgctgctgaccgtttcctcgctagcttatccagt
tttatccagggactggacactaagaacaacgtcaagatctggttcaacaacaaggggtgg
catagcattggttctttcctgaacgtgatgaacaacggaatcctgcgtgccagcctgccc
gcgggccaggaccccagcaagtatggcatccaggccttcaaccacccactcaacctcacc
aaggagcaactgtcccaggtcgcactgatgaccacctctgtggacgtgctggtgtccatc
tgcgtgatcttcgccatgtctttcgtcccggccagcttcgtagtcttcctcattcaggag
agagtcaacaaggccaaacacatgcagttcatcagtggggtgcaacccttcctctattgg
ctgtccaacttcatctgggacatgtgtaactacatcgtccctgctactctggtcattatc
atcttcatctgtttccaacaagacgcctatgtctcctccaccaacctgcctgtactggcc
ctactgctgctgttctatgggtggtccatcacgcccctgatgtacccggcgtccttcttc
tttaagatccccagcacggcctacgtggtgctcacctccgtcaacatcctcatcggcatc
aacggcagcgtctccacctttgtcctcgagctcttcggcagcaatgagatcggagggatc
aacgacatcctgaagaatgtgttcctgatcttccctcacttctgtctgggtcgaggcctc
atcgacatggtgaagaaccaggccatggccgacgctctggagaggtttggtgagaaccgg
ttccgttcccctctggcgtgggacatggtgggcaagaacctgttcgccatggctgtgcag
ggtgtggtcttcttcactatcaccgtgctcatccaataccgcttctgtatcaaggccaga
tctatgagcaccgaccagaaacctattggtgaagaggatgaagacgtggccagagagagg
caaaggattctgggaggagggggacagtctgacattctggaactcaagcagctgaccaag
gtgtacaatagaaaacagaaaccagcagtggatcgtctttgtgtcggaattcctccagga
gagtgttttggtcttcttggagtcaacggagcaggaaagacgagcaccttcaagatgctg
accggagactccatagtcacgagtggtgaagcttacctggcgggaaagagtgtgttgacg
gagatcaacgaggtgcaccagaacatgggctactgccctcagtttgatgctatcaacgac
ctgctgactggcagggagcacctggagttctacgccatcctgaggggggttcccgagaag
gaagtgtgtgaggtggcagagtggggcatccgtaaactaggcctgatcaagtatgtggac
aaggcagcagggagctatagtggagggaacatgaggaaactctccacggccatggcactg
atcggtggccccccggtggtcttcctggacgagcccaccactggtatggaccccaaggcc
agacgggctctgtggaactgcattctcagtatcgtcaaggaggggcgatcggtggttctc
acctcgcacagtatggaggagtgtgaggccctgtgtacgcggatggccatcatggtcaat
gggaggttccgctgcctgggcagcgtacagcacttaaagaacagatttggggatggctac
accatcatcctccgggtggcaggacctgacccggacctgaggccggtgatggagttcatt
gagaaggagcttccaggcagcactctgaaggagaagcacaggaacatgctgcagtatcag
ctgtcctcctccaaaacctccctggcacgcatcttcagcatcctggccaagaacaaggag
tggctgcacattgaggactactccgtttcccagacaacactagaccaagtatttgtcaat
ttcgccaaggaccaaagtgacgaggaccacttaaaagacatttcgatgcacaagagagac
gcggtggcagtggacattactcagctcaagtcttttctcacagacgagaaggccagggag
agctgcgtgtga
DBGET
integrated database retrieval system
