Oncorhynchus kisutch (coho salmon): 109894814
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Entry
109894814 CDS
T09179
Symbol
npas3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109894814 (npas3)
Transcription factors [BR:
oki03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109894814 (npas3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
109894814
NCBI-ProteinID:
XP_031684558
Ensembl:
ENSOKIG00005009455
LinkDB
All DBs
Position
LG7:complement(23283360..23666149)
Genome browser
AA seq
1030 aa
AA seq
DB search
MIRIFPDFSVQVTAAGGGAGGMPSGPAVGRIPGTTNGNPQNVQGITSYQQREIKTLHPFC
MEGSEEEAIVDAQFMSKFPHDPYWERPANASSCSASRPKTLHLGGGQQHTSSPWLQALRK
EKSRDAARSRRGKENFEFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPP
WNLRIEGPPPNTSVKAIGVQRRRTPSAVASEIFEPHLGSHILQSLDGFVFALNKEGRFLY
ISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTATEDGASS
ASSSSHAETPEPVESTSPSLLSPDNTLERSFFIRMKSTLTKRGVHIKSSGYKVIHVTGRL
RIRMALTHSRSVPIQIMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLNIVYCENRISD
YMDLTPVDIVGKRCYQFIHAEDVEGIRHSHLDLINKGQCVTKYYRWIQKNGGYIWIQSSA
TIAINAKNANEKNIIWVNYVLSNPEYKDTPMDIAQLPNLPEKASESSETSDSESESKENS
EDNENSKSDGKGNQTENSEDPETDSKKQQQGQSSSEQEMRRQEEGDSSSNPESQESEDDL
EPSDCELETKERRLGRLGGLHIKVEHYGDRDGRVELHNSPSSSDEEEDDDDDEEDDDDDD
SVKDCDRATEMLAVPAASKQQKRKKRRKKQKWDGSRSRRLRLSSATTSPGTMNHPTLGGD
APLLLPPSPASASVLKIKTEMSEPINFDNDSSIWNYPPNREISRNESPYSMTKHVPTHDT
FPSPQPGSLQVSIPDSVLTPPGTEGGGGGGGTRKGVPPSFNGNSSTPSSASSVASLAPPS
SSGSSSDPLSPPLSASPRDKQQGQGTPTTSNSSSSLLYTSDLEALQRLQAGNVVLPLVHR
VTGTLATTSTAASRVYTTGTIRYAPADVTLSMQAGANLLPNNVAHAMNFVDVNGSPGFGI
DPKTPMEMLYHHVHRLNMAGPFGGAVSGASLTQMPAANVFTTAEGLFSTLPFPIYSNGIH
TTQTLERKED
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagcgttcaggtgacggcggcaggtggaggagccggg
ggaatgccatcaggtcctgcggtggggagaatccccggtaccactaacgggaacccgcag
aacgtccaggggatcacgtcctatcaacaaagggaaattaaaaccctacaccctttctgc
atggagggatcagaggaggaggccatagttgatgcccaattcatgtccaaattcccccac
gacccttactgggagaggcccgctaatgccagctcctgttctgcctctaggcccaagaca
ctccaccttggaggagggcaacaacatacctcatcgccatggttgcaggctctgaggaag
gagaagtcccgggatgcggctcgctcgcggcgggggaaggagaactttgagttctatgag
ctggccaagatgctgcccctgcctggcgccatcaccagccagttggacaaggcttccatc
atccgcctcaccatcagctacctgaagatgagggacttcgccaaccagggggacccgcca
tggaacctgcgcatagaaggcccaccacccaacacctccgtcaaagctataggagtacag
cgaaggaggactcccagtgcagtagcctcagagatcttcgagccacacctcgggagccac
atattgcagtccctggatggatttgtatttgcactaaacaaggagggaaggtttttgtac
atctctgagacggtgtccatatacctgggactttcacaggtggagctgacaggcagcagt
gtgtttgactacgtccaccctggcgaccacgttgagatggcagagcagctgggcatgaag
ctgcctccaggccgaggcctcctctctcagggcactgccacagaggacggcgccagctct
gcctcctcctcctcacacgcagagacccccgagccagttgagtccaccagccccagcctg
ctttccccagacaacactctagagcgctccttcttcatccgtatgaagtccacactgacc
aagagaggtgtccacatcaagtcttcaggctataaggtgatccatgttacaggcaggctg
agaatccggatggcattgacccacagtcggtctgtacccattcagatcatgggcatggtg
gtggtagcccacgccctcccccctcccaccatcaacgaggtgcgcatagactgccaaatg
tttgtcacccgggtcaacatggacctcaacattgtctactgcgagaatagaattagcgac
tacatggacctgacgccagtggacatcgtagggaagaggtgctaccagttcattcatgcg
gaggatgtggagggtatccggcacagccatttagacttgataaacaagggacagtgtgtg
accaagtactaccgctggatccagaagaacggtgggtacatctggatccagtccagtgcc
accatcgccatcaatgccaagaacgccaatgaaaagaacataatctgggtcaactacgta
ctcagtaatccagagtacaaggacacgcccatggacatcgcccagctgcccaaccttcca
gagaaagcctctgagtcttcagagacttccgactccgagtccgagtccaaggagaactct
gaagacaacgagaactcgaagtcggacgggaaggggaaccagactgagaacagcgaggac
ccggagacagacagtaaaaagcagcagcagggccagtcgtcctcagagcaggagatgagg
cgtcaggaggaaggagacagctcctccaacccagagagccaggagagcgaggatgacctg
gagcccagcgactgcgagctggagaccaaggagaggagactaggccgactggggggcctg
cacatcaaggtggagcactacggagatagagatggaagagtggagctgcacaactcgccg
tcctcctctgacgaagaggaagatgatgacgatgatgaggaggatgatgatgacgacgac
agcgttaaagactgtgacagggccactgagatgctcgccgtccccgccgccagcaagcag
cagaagcgcaagaagaggaggaaaaagcagaagtgggacggtagtcgttctagacgcctg
cgcctctcctctgccaccaccagccctggcaccatgaaccaccccaccctggggggggac
gcccccctcctgctgcccccctcccctgccagtgcatctgtgctcaagatcaaaacagaa
atgtccgagcccatcaacttcgacaacgacagcagcatctggaactaccctcccaacagg
gagatctccaggaatgagtccccctacagcatgacgaagcacgtcccaacccacgacacc
tttccctccccacagcctggcagtctgcaggtctccatcccagactcagtgctcactccc
ccaggaacagagggaggcggcgggggtggaggaaccagaaagggcgtacccccctccttc
aacggtaacagcagcaccccctcctcagcctccagcgtggccagcctggcccctccctcc
agctctggctcctcctccgaccccctgtccccacccctctcagcctcgccgcgcgacaag
cagcagggtcagggcacccccaccacctccaactcctcctcctccctgctgtacaccagc
gacctggaggccctgcagaggttgcaggctgggaacgtggtgcttcctctggtccaccgg
gtcaccggcaccctcgccacgaccagcactgccgcctcccgggtgtacaccactggcacc
atccgctatgcccccgccgacgtcaccttgtccatgcaggcaggtgccaacctgttgccc
aacaacgttgcccacgctatgaactttgtggatgtcaacggtagccccggcttcggcatc
gaccccaagacgcccatggagatgctgtatcatcacgtccaccggctcaacatggctggc
ccctttggcggtgccgtgtccggcgccagcctcacccagatgccagcagccaatgtattc
accacggcagagggactgttctctactcttccattccctatctacagtaacgggatacac
accacacaaactctggagcgcaaagaagattag
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