Oncorhynchus kisutch (coho salmon): 109894871
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Entry
109894871 CDS
T09179
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
109894871
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109894871
03037 Cilium and associated proteins [BR:
oki03037
]
109894871
Transporters [BR:
oki02000
]
Other transporters
Pores ion channels [TC:
1
]
109894871
Cilium and associated proteins [BR:
oki03037
]
Other cilia and associated proteins
Stereociliary proteins
109894871
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
COX16
Piezo_TM1-24
Toddler
Motif
Other DBs
NCBI-GeneID:
109894871
NCBI-ProteinID:
XP_031685297
Ensembl:
ENSOKIG00005017283
LinkDB
All DBs
Position
LG8:39189371..39205540
Genome browser
AA seq
951 aa
AA seq
DB search
MGWLLFSPSEEPEVSIGLEDTDEEDTVIDSDGRQERAKEKERKKERDRKRRRNVARRASS
ARKEGKELEDRPGREERRGRKKRDKEGKGKGGEDERQEEVKNDTVAKTQKNFSNENTRKL
EQKEIEVVGEEDGDTEEKRKNGRPEKGGKKEDNGRGETVEKKQKKKRVETSAEHESSEEE
EDEEEKVGEEKPEVLSPEELEKLKEEVDERKKLISTLRGKPWPMRKKLLTLRESHEFVEK
YEGALGKGKSRKLYAYKVMMLKKWMKFQRDFENFKTACVPWEMKIKEIESHFGSSVASYF
IFLRWMYGINMILFGLTFGLVMVPEALMGRPYGSMPRKTVPRADEANAMDFAVLWDFGGY
AQYSVLFYGYYNSQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANEDGGGDNN
SFNFSWKMFTSWDYLIGNPETADNKFASITTSFKEAILEEQESRKDDNIHLTRFLRVLAN
FLVLCCLAGSGYLIYFVVRRSQKFALEGLESHSWWERNEVNMVMSLLGMFCPMLFDVISA
LENYHPRIALQWQLGRIFALFLGNLYTFIIALMDEINLKREEEEVLKLNMTIWEASLYNG
TMGANSTAPPITVHPADIPRGPCWETMVGQEFVRLIVSDTMTTYITLLIGDFLRAVLVRF
LNYCWCWDLEAGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNVLRLHVSMYLQ
CWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFDCGPFSGKSR
MFDVIQETLESDFPAWFGKVFSYASNPGLVLPFLLLMVLAIYYLQSTSKSYKQANLELKK
KLQTQNEENKKKTKMAALKAAMDLEEAQKARSEAPRQQRKNNASQQSYTEDREKKGGEHR
AHQGKSDHQIPPSATSPPAPRGHRIPGPLPGNQWQPAPSVQRVPNSQRHRV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggggtggctgctcttctccccctctgaggaaccagaagtcagcattggcttggaggat
acagatgaagaggacacagttattgactctgatgggaggcaggagagggcaaaagagaag
gagagaaagaaagagagggaccgaaagagaagaagaaatgtagcaagaagagcttccagt
gcaagaaaagaaggaaaggaattggaggacagaccaggaagagaggagaggagaggacga
aaaaagagggataaggaggggaaagggaaagggggagaggatgagaggcaggaagaagta
aagaatgacacggttgctaaaactcaaaagaatttcagcaatgaaaacaccagaaagctg
gagcaaaaagagatagaggttgtaggagaggaagatggagataccgaggagaagaggaaa
aatggacgcccagaaaaaggcgggaaaaaggaggacaatggaagaggagagacagttgag
aagaaacaaaagaaaaaaagggttgagacaagtgcggagcatgagtcatcagaggaagag
gaggatgaggaagagaaagtgggagaggagaaaccagaggtcttgtctcccgaggagttg
gagaagctgaaggaggaagtggatgagaggaagaaacttatctcgaccctaagaggaaag
ccttggcccatgaggaagaaactgctaactctacgggagtcccatgagtttgtggagaaa
tatgagggagctcttgggaaaggaaagagcagaaaactgtatgcatataaagtcatgatg
ttgaagaaatggatgaagtttcagagggactttgaaaacttcaaaactgcttgcgttcca
tgggagatgaaaatcaaagagattgagagccattttggctcctcggttgcctcctacttc
atattcctgaggtggatgtatggcatcaacatgatcctctttgggctgacgtttggcctg
gtcatggtgccagaggctctgatgggcaggccgtatggtagcatgcccagaaagactgtc
cctagagctgacgaagccaacgccatggactttgctgtcctatgggactttgggggctac
gcccagtattctgtcctcttttatggctactacaacagccagcgcgccattggctggctc
aagttccgcatgcccctctcctacttcctggttggcgtgggaactgtggcctatagctat
atggtggtgataaggactatggcccggaatgctaatgaggacggtggcggagacaacaac
agcttcaatttcagctggaagatgttcaccagctgggattacctcatcggcaaccctgag
acagccgacaacaagtttgcctccatcaccaccagctttaaggaggccattctggaggaa
caggagagcaggaaggatgacaacatccacttgactcgttttctgcgggttctggccaac
ttcctggtgctgtgctgtctagcaggaagtggatatctcatctactttgtggtgcgtcgc
tcccagaagtttgctttagagggactggagagccatagctggtgggagaggaatgaggtg
aacatggtgatgtccctcctggggatgttctgtcccatgctgtttgatgtgatcagtgca
ctagagaactatcacccccgcattgctctacagtggcagctgggacgcatcttcgcccta
ttcctggggaacctttacaccttcatcatcgcactcatggatgagatcaacctcaaacgg
gaggaggaggaggtgctgaagcttaatatgactatatgggaggccagtctgtataatggg
accatgggagcgaatagcacagctcctcccatcaccgtccaccctgccgacatcccacga
ggaccctgctgggaaaccatggtgggacaggaatttgtccgactcattgtgtcggatact
atgacaacctacatcacgctcctgatcggggacttcttgcgtgctgtgctggtgcgtttc
ctcaactactgctggtgttgggacttggaggctggatttccctcctactcagagttcgat
gtcagtgggaatgtcctgggcctgatcttcaaccaaggcatgatatggatgggtgcgttc
tatgccccctgcctgcctgctctgaacgtgctgagactgcatgtgtcaatgtacctgcag
tgctgggccgtcatgtgctgtaatgttcctcaggagagggtgttcaaggcctcaggctcc
aacaacttctacatggctatgctactggtcatccttttcctctcaacgctgcccgccatc
tacaccatagtcactatccccccctccttcgactgtggccccttcagtgggaagagccgc
atgtttgatgtgatccaggagacgctggaatctgatttccctgcctggtttgggaaggtg
ttcagctacgcctccaaccctggcctggtgctgcctttcctactgctgatggttttggcc
atttattacttgcagtctacatccaaaagctacaagcaagccaacctggagttaaagaag
aaacttcaaacccaaaatgaagagaacaagaagaagactaaaatggcagcactgaaagct
gccatggatttagaggaggctcaaaaagctcggtcagaagcaccgcggcaacagagaaaa
aacaacgcctctcagcaatcttatacggaagatagagaaaagaagggtggggaacacaga
gcacatcaaggaaagagcgaccatcaaattcccccttctgccaccagccccccggccccg
aggggccacagaatccctgggcccctaccaggtaaccagtggcaaccagcacccagtgtt
cagagggtcccaaactcccagagacaccgagtatga
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