KEGG   Oncorhynchus kisutch (coho salmon): 109895027
Entry
109895027         CDS       T09179                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109895027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109895027
   03041 Spliceosome [BR:oki03041]
    109895027
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109895027
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109895027
Spliceosome [BR:oki03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109895027
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_3
Other DBs
NCBI-GeneID: 109895027
NCBI-ProteinID: XP_020344273
Ensembl: ENSOKIG00005003248
UniProt: A0A8C7D1H7
LinkDB
Position
LG1:38089732..38096875
AA seq 370 aa
MSKESPREPEQLRKLFIGGLSFETTDESLRTHFERWGSLTDCVVMKDPVTKRSRGFGFVT
YSSVDEVDASMEARPHKVDGRQVEPKRAVSREDSSRPGAHTTVKKIFVGGIKEDTEEHHL
RDYFDQFGKIEVIDIMTDRTSGKKRGFAFVTFDDHDAVDRIVIQKYHTVNGHNCEVRKAL
SKEDMNRSGPRGGNFGRGGGYGGGFGGGRGGGGGYGDNDGYNNYGGNGGGYGGGPGGYGG
GNRGYGGGGGGGYGNQGGSYGGGGGYDNYNNGGGGGGSYRGGNYGASSSGGGSSSGSGGG
GGGDYNDFGNYNSQSSSSYGPMKGGSGYSGGGGGGRSSGPYGGGGGVGGGGGYGGGSGGG
YGGGSGGRRF
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgtcgaaggagtctccccgtgagccggagcagctccgcaagctcttcattggtgggctg
agcttcgagaccaccgacgagagtttgcggacccattttgaaagatggggatccctcaca
gattgtgtggtaatgaaagatccagtcacaaagagatcgaggggctttggctttgtcact
tacagctctgtggatgaagttgatgcatcaatggaggctcgtcctcataaggttgatggc
cgccaagtggagcccaagagagcggtgtccagagaggattcctcaaggccaggtgctcac
accactgtgaagaagatctttgtgggtggcatcaaggaggacacagaggagcatcacctt
agggactactttgatcaatttggcaagatcgaagtcatcgacatcatgactgataggacc
agtgggaagaagagggggtttgcctttgttacatttgatgatcatgatgcagtcgatagg
attgtcatccagaagtatcatacagtgaatggtcacaactgtgaagtgaggaaggctttg
tcaaaggaagacatgaaccggtccgggccaagaggtggaaactttggtagaggtggcgga
tatggaggtggtttcggtggagggagaggaggaggtggaggatatggtgataacgatgga
tacaataactatggaggcaatggtggcggctatggtggaggtcccggcgggtatggtggt
ggcaaccggggctatggcggaggcggcggcggtggttatggtaaccagggtggcagctat
ggaggaggaggaggatacgacaactacaacaatggaggtggtggtggtggaagctacaga
ggtggtaactacggagctagtagtagtggtggtgggagcagcagtggaagtggtggtggt
ggtggtggagactacaatgactttggcaattacaacagccagtcgtcctccagctacggc
ccaatgaaaggaggcagcggctatagtggcggcggtggagggggccggagcagcggccca
tatggtggtggtggtggtgttggtggtggtggtggttacggaggaggctccggtggtgga
tatggagggggctccggaggtcgaaggttctag

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