Oncorhynchus kisutch (coho salmon): 109895062
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Entry
109895062 CDS
T09179
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
109895062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109895062
Transporters [BR:
oki02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
109895062
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Gene cluster
GFIT
Motif
Pfam:
SNF
NADH_dh_m_C1
Motif
Other DBs
NCBI-GeneID:
109895062
NCBI-ProteinID:
XP_020344302
Ensembl:
ENSOKIG00005036918
UniProt:
A0A8C7JQ72
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Position
LG8:40547722..40564372
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AA seq
593 aa
AA seq
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MTRQDTATPTGSLSAQGPSNTGYNNNPAPVPVITQTNSRDKWSKKMDFLLSVIGFAVDLG
NVWRFPYICYQNGGGAFLIPYIVMAIFGGVPLFYMELALGQFHRTGAISIWKHICPIFKG
IGYAICVIALYVSFYYNTIIAWALFYFYSSFASVLPWTNCDNAWNTENCTNYFLKDNVTW
NNYSRSPAEEFYTRNVLEIHKSDGLRNVGGVRWQLMLCLFLIFTIVYFSLWKGVKTSGKV
VWVTATLPYVVLFILLIRGATLPGAWKGVVFYLKPKWEKLFETSVWVDAAAQIFFSLGPG
FGVLLALSSYNPFTNNCYRDAIVTSLVNCLTSFMSGFVIFTVLGYMAEKRNVNVEDVARD
KGPSLLFITYPEAIANMTGSTFFAIIFFVMMITLGLDSTFGGLEAIITAVMDEYPGYLAN
RRELFVLGLVVVCFLGSLSTLTNGGAYVVKLLEEFGVGSSIIAVGFLEAIAVSWFYGITR
FSNDIKSMLGYSPGLFWKVCWVAISPAFLAYIIVSSLLKPPPLQLFDYKYPDWSITVGYV
IGASSFMWIPIYMVYKLVWTPGSLKQRLAVCLRPERTIMPEIHTDSLNMSPVP
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgacccgccaagacacagcgaccccaacgggaagcctgagcgcacagggcccctcaaac
accggttacaacaacaacccagcgccggtacctgtgatcacacagacgaactcaagagac
aaatggagcaaaaagatggattttcttttatcagtcattggcttcgcggtagacttagga
aacgtttggagatttccatacatttgttaccaaaatggaggcggggctttcctcatcccc
tacattgtcatggccatctttggaggtgtgccactattttacatggaactggccctggga
cagttccacagaactggcgccatatccatatggaaacacatatgccccatcttcaaaggc
attgggtatgcgatctgtgtcatcgcgctgtacgtctccttctactacaacaccatcatc
gcctgggcacttttctacttctactcgtccttcgccagcgtcctgccctggactaactgt
gacaacgcctggaacactgaaaactgcaccaactacttcctgaaagacaatgtgacctgg
aacaactactccaggtcacctgctgaggaattttacacgaggaatgttctggagatccac
aagtccgatgggctgcgtaacgtggggggtgttcgctggcagctgatgctctgcctcttt
ctcatcttcactatcgtttacttcagtctctggaagggagtgaagacatcagggaaggta
gtgtgggtgacggccaccttgccctatgtggtgctcttcatcctgttgatccgtggtgcc
accctaccaggtgcatggaagggagtggtcttctacctaaagccaaaatgggagaaactc
ttcgagaccagtgtgtgggtagacgctgcggctcagatcttcttctccttggggccaggc
tttggggtgctccttgccctctccagctacaacccgttcacaaacaactgttatcgtgac
gccatagtgaccagcctggtgaactgcctgaccagcttcatgtctggttttgtgatcttc
actgtgctggggtacatggcagagaagagaaatgtgaatgtggaggatgtagccagagac
aagggtccaagcctactcttcatcacctatccagaggccatagccaacatgacagggtca
acattcttcgccatcatcttcttcgtgatgatgatcacgcttgggctcgacagcacgttt
ggaggactggaggctatcattactgctgtgatggatgaataccctggttacctggcgaac
agacgggagctgtttgtactgggcttggttgttgtgtgctttttgggctccctcagcacc
cttaccaatggcggggcctatgtggtgaaactgctggaggagtttggggtgggttcctcc
atcattgcagttggttttcttgaggccatcgccgtttcctggttctatggtatcacgaga
ttcagcaatgacattaaatccatgttaggctattctcctggattattctggaaggtgtgc
tgggtggccatcagtcctgcatttctagcgtatataatagtgagctccctgcttaagcca
ccccccctccaactctttgactacaagtacccagactggagcatcacggtgggctacgtc
atcggggcctcctccttcatgtggatccctatctatatggtctacaagctggtgtggacc
cccggatcactgaaacagcgcctagccgtgtgtctgagacctgagaggaccatcatgcca
gagatccacacagactccctcaacatgagtcctgttccatag
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