Oncorhynchus kisutch (coho salmon): 109895109
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Entry
109895109 CDS
T09179
Name
(RefSeq) retinoic acid receptor gamma-like isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109895109
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oki03310
]
109895109
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109895109
Nuclear receptors [BR:
oki03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
109895109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
109895109
NCBI-ProteinID:
XP_020344349
Ensembl:
ENSOKIG00005003174
LinkDB
All DBs
Position
LG1:37705912..37783471
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AA seq
493 aa
AA seq
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MATNRERQVGHMTGFSPAVYPFAFNSMRSHSPFDLLANSSLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPESYELSG
ELEELVNKVSKAHKDTFPSLVQLGKYTTNSSADHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTELVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPQKVDKLQEPLLEALKIY
ARRRRPNKPHLFPRMLMKVTDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFED
SSDSGDSASAAAPPAIQTIKKEREEEKSLEEEDEEDEWGDEDRERGADSDGEPWGEAAVA
AGGSQKGANGRAQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaatagggaacggcaggtgggtcacatgactggcttttcacctgctgtctac
ccctttgccttcaactccatgaggagccactcccccttcgacctgctggccaatagcagc
ctgtttggacgatttggggcagacctaccgaaagagatggctgcattgtcagtagagacc
cagagcaccagctctgaggagatggtgcccagttcaccctctccaccccctcctccccgc
atctacaagccttgcttcgtgtgccaggacaagtcctctggataccactatggggtcagc
tcatgtgagggctgcaagggattcttccggcgcagtattcagaagaacatggtgtatacc
tgccaccgagacaagaactgtcagatcaacaaggtgacccgtaaccgctgtcagtactgc
cggctgcagaagtgctttgaggtcggcatgtccaaagaagcagtgcgtaatgacaggaac
aagaagaagaaagatgtgaaggaggaggtggtgttgccggagagctatgagctcagtgga
gaactggaggagctagtcaacaaagtcagcaaggcccacaaagacaccttcccctcactc
gtccagctgggcaaatacactacaaactccagtgcagaccaccgtgtgcagttggatctg
gggctgtgggataagttcagtgaactttccaccaagtgcatcatcaaaatagtggagttt
gccaagcgcctgccaggcttcaccaccctcaccatcgctgaccagatcacacttctcaaa
tcagcctgtctggacatactgatgctgaggatctgcactcgctacactccggagcaggac
acaatgaccttctcagacgggctgaccctgaaccggacccagatgcacaacgcaggcttc
ggcccgctcacagaactggtgtttgcctttgctggccagctgctgcctctggagatggat
gacacagagactggcctcctcagcgccatctgcctcatctgtggagaccgtatggacttg
gaggagccccagaaggtagacaagctgcaggagcccctcctggaggccctaaagatctac
gcccgccgcagacgccccaacaagccacatttgttcccccgtatgctgatgaaggtcact
gatctcaggggcatcagcaccaagggtgcggagagggccatcactctgaagatggagatc
ccaggccccatgcctcctctgatcagggagatgctggagaaccctgaagcctttgaggac
agcagcgactctggggacagcgcctctgccgccgccccccctgccatacagaccatcaag
aaagagagagaggaggagaagagcctggaggaggaagatgaggaagacgaatggggggat
gaggatagggagagaggggcggacagcgatggggagccttggggggaggctgcagtggca
gcaggggggtcccagaaaggggcgaatgggagagcccagtga
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