Oncorhynchus kisutch (coho salmon): 109895215
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Entry
109895215 CDS
T09179
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oki03037
]
109895215
04812 Cytoskeleton proteins [BR:
oki04812
]
109895215
Cilium and associated proteins [BR:
oki03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
109895215
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
109895215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_LRWD1
LRR_NXF1-5
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
109895215
NCBI-ProteinID:
XP_031687052
Ensembl:
ENSOKIG00005015954
LinkDB
All DBs
Position
LG8:73698662..73760893
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AA seq
647 aa
AA seq
DB search
MGRLRLLNFQHNLITHIHNLSHLRHLAFLDLYDNHISQMSGISALASLRVLMLGKNRIQR
ICSLDNLTKIDILDLHGNQISQIGNLSHLSELRVLNLAGNCISRVDNLQGLDSLTEINLR
RNCISTVTEVDQLPCLQRLFLSCNSITSFYELACLGESCSLSELTLDGNPVALETWYKQA
ALRCVLQLRQLDMKRVTEEERRMACVTARKEDEKKRESHKQAMHKSPAHVVPQQFYTQLG
LKSQDSSVTSKEKRRLAIRNAALQWEGVRACLEHPAQNGAKEEVSPEASPAHSPAQTNGL
ALEPSPDEQLRRVSPVSAMDRPTGGSETRIRSTSRPNSPRDPKLLEAGGASLQSLSLSDS
HLAELDGETLRLFGLGALEALERGWGVQTAGAVTVIAFRYIHFDAIVPTLPRIRVKFPNL
SHLIFLETNVSRLPQLAALAQVRRLDQLTIHPKGNPVVSLSLWRSFLIYRLHHFNLHKIN
NLEVTMNDVISAERLFGTLGHIAATETPRCRLLVLLEESRKRQLQFLLEGRGRRAGLSPE
ELRDNGKLLGEGLSRALFNYPSRDCCSVGAESPEEGAMESSSERRAVMEQYIQAQVQRTS
DTNLKGESLHKLWPSMFMEMVRDYVLEMRDRPTFRQACLNRLSTQGK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggctgcggctgcttaactttcagcacaacctcatcacgcacatccacaatctg
tctcatctgcggcacctggccttcctagacctgtatgacaaccacatctcccagatgtct
ggcatctcagccctggcctctctcagagtgcttatgctgggcaagaacagaatccagagg
atatgcagtctggataacctgactaaaatagatattctggacttgcatggcaatcagatc
tcccagatagggaacctctcccacctgtctgagctgcgtgtgttgaacttggcagggaac
tgcatctccagggtggacaacctgcagggcctggactcactgaccgagatcaacctgaga
cgcaactgcatctccactgtgacagaggtagaccagctgccctgcctccagcgcctcttt
ctcagctgcaacagcatcaccagtttttatgagctagcctgcctgggagagtcgtgctcc
ctttctgagctcaccctggatgggaacccagtagccctggagacatggtacaagcaggcc
gccctgcgctgtgtgcttcaactcagacagctggacatgaaacgtgtcacggaggaggag
agacgtatggcctgcgtcacggcccggaaggaggatgagaagaagagggagagtcacaag
caggccatgcacaagagtcctgctcatgttgtgcctcagcagttctacactcaacttgga
ctcaagtctcaggactcctcagtgacaagcaaggagaagcggcgtctggccatccgtaat
gcagcactgcagtgggagggggtcagggcctgcctggagcacccggctcagaacggagcc
aaggaggaagtcagccctgaagcaagccctgcccacagtcccgcccagaccaatggcctt
gcactggaaccttctccggatgagcagctcagacgggtgagtccggtgtcggctatggac
aggccaacagggggcagtgagacccggatacgctccaccagtcgccccaacagtcctcga
gaccccaagctccttgaggcagggggtgccagcctgcagagcctctccctgtcagacagc
cacctggcggagctggatggggaaaccctgcgcctgttcggcctcggggccctggaggcc
ctggagagaggctggggggtccagactgcaggggccgtcactgtcatagccttccgctac
atccactttgatgcgatcgtgccaacactgccacgcataagggtcaagttccccaaccta
tctcacctgattttcctggagaccaacgtcagccgtcttccccagctggctgctctggcc
caggtgagacgtctggaccagctgaccatccacccaaaggggaaccctgtagtcagcctt
tccctgtggagatccttcctcatctaccgcctgcaccacttcaacctgcacaagatcaac
aacctggaggtgaccatgaatgacgtgatctctgcagagcgtctgtttgggacgctgggt
catattgctgccaccgagacaccacgctgccgcctgctagtactactggaggagtccagg
aagcgtcagctgcagtttctgttggaggggcgtgggcgccgcgcaggcttgagcccagag
gagctgcgtgacaacggcaagctgctgggagagggcctgagcagagccctgttcaactac
cccagtagagactgctgcagtgtgggagcggagagcccagaggagggtgctatggagtcg
tcatcggagcgccgcgctgtgatggagcagtacatacaggctcaggtccagaggacatct
gacaccaacctgaagggggagtccctccacaaactgtggccctccatgttcatggagatg
gtgagagactatgtgctggagatgagggaccgaccaaccttccgtcaggcctgcctcaac
aggctctccacacagggaaagtga
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