Oncorhynchus kisutch (coho salmon): 109895267
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Entry
109895267 CDS
T09179
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109895267
Transcription factors [BR:
oki03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
109895267
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
YabA
DUF5365
ApbA
Motif
Other DBs
NCBI-GeneID:
109895267
NCBI-ProteinID:
XP_020344480
Ensembl:
ENSOKIG00005000624
LinkDB
All DBs
Position
LG1:complement(36881520..36885504)
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AA seq
425 aa
AA seq
DB search
MEMERIPSAQPTPKHQQAELSDMQGMDFPMYVYKSRRGMKRGDDSKETYKLPHRLIEKKR
RDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTTLLENQQQKILSLQNG
MQIEQSSPSQENSEEIFRSGFHVCAKEVLQYLVNQEGHGDLSPSHMVNHLHKVATEVLQG
PPRSPCKPRSEETTIHYQHHQAHREKPAGQPPKPSEGHGKNCVPVIQRRYAHVGGEQSGS
DTDTDSGYGGEQVEHLASHTGYYGQERQLKRALGEKRASLCIKQEDEACHKRSRVESSED
ESLSCGESSSSSSSGHGSYMSAYSPHQAQPHPLCMPFYLIPPSAAAYLPMLEKCWYSGAM
PMIYPGLGGSAQGMPSDRHAPSPSIMMSPRGRSPSPPTVAQSPMDSPAFLQVLKQVLPMN
LETKD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaaaggattccaagtgcgcaacccacccccaagcaccagcaggctgagctg
tctgacatgcaagggatggatttccctatgtatgtatacaaatcccgtcggggaatgaaa
cgaggagatgatagcaaggaaacctacaaactgcctcaccgacttatcgagaagaaaagg
cgtgacaggataaacgagtgcatcgctcagttgaaagatttattgcccgagcacctgaaa
cttacaactcttggccatctggagaaggctgtggttttggagctcacgcttaagcatgtg
aaagctctaaccactctactggaaaaccagcagcagaaaatcctcagtctgcagaatggc
atgcaaatcgagcagtcctctcccagccaggagaacagtgaggagatcttccgctcaggc
ttccatgtctgtgccaaggaggtgctgcaatacctggtcaaccaggagggtcacggtgac
ctttcaccctcccacatggtcaaccacctgcacaaggtggccactgaggtcctccagggt
cctccccgtagcccctgcaaaccccggtctgaagagaccaccatccactaccaacatcat
caggcccacagggagaagcctgcaggccagccccccaagcccagtgaaggccatgggaag
aactgcgttcccgtcatccagcggaggtatgcccatgtgggcggcgagcagagcggcagc
gatacagacacagacagcggctacggtggcgagcaggttgagcatctggcgtcgcataca
gggtactacggccaggagagacagctgaagagggcgctgggagaaaagagggcatcactt
tgcattaagcaggaagatgaggcgtgccacaaacgcagccgggtcgagtcatccgaggac
gagtctctctcatgcggagagtcatcctcatcctcctccagtggccacggcagctacatg
agcgcctactcccctcaccaggcccaacctcatcccctttgcatgcccttctacctcatc
cccccctctgccgctgcctatctgcccatgctggagaagtgctggtactcaggggccatg
cccatgatttaccctggcctgggaggctccgcgcagggcatgcctagtgacaggcatgcc
ccctctccctcgatcatgatgtcccccagggggcgctctccctctccccctaccgtagcc
caaagccccatggactccccagccttcctccaagtgttaaagcaggtacttcccatgaac
ctggaaaccaaagactga
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