Oncorhynchus kisutch (coho salmon): 109895278
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Entry
109895278 CDS
T09179
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109895278
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109895278
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109895278
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
ATP-synt_B
FraC
IQ
Neur_chan_memb
GPHH
Dynamin-like_hel_bact
Motif
Other DBs
NCBI-GeneID:
109895278
NCBI-ProteinID:
XP_031678735
Ensembl:
ENSOKIG00005000483
LinkDB
All DBs
Position
LG1:36617035..36734067
Genome browser
AA seq
1844 aa
AA seq
DB search
MIIMSTILTNCVFMTFSDPPEWNKIVEYTFTGIYTFESLTKIVARGFCIDGFTFLRDPWN
WLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALVQSVKKLSDVM
ILTVFCLSVFALIGLQLFMGNLRQKCVIWPINSTENFLANGSKGFDWNEYIMSERNFYFI
PGQLDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGWAFLTLFRLMTQDFWENL
YMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATIEEAEQKEAEFKAM
LEQIKNQQEDAQAAAMATSAGMVSEADGVEGGDATEGGGHLSRSSSDASKLSSKSAKDRR
NRKKKSRQKEEEKKEKGEKGEKVDHEKHVKSESDDGSRRSIFRFPGNRLGRKSSIMNQSL
LSIPGSPFMSRHNSRSSIFSFNKGRPPKDVGSENEFADDEHSTVEESEDRRGSLFIPYRR
SSYSGYSQGSSRLINPLAPHIGGKRNSTVDCNGVVSLIAHQPGGSLLPETTEVEGKKKHS
GSLMVSVDQLSRNKDRTNSVMSVATHTHSHTLLEELEDSQRACPSWWYKFANLFCVWDCF
PFWLKIKYVLNLIVMDPFVDLAVTICIVLNTLFMAMEHYPMTPRFDETLSVGNLVFTGIF
AGEMFAKLAAMDPYYYFQEGWNCFDSFIVTLSLVELVLADIEGLSVLRSFRLLRVFKLAK
SWPTLNMLIKIIHSSVGALGNLTLVLALIVFIFAVVGMQLFGKNYKDCVCKIAISCKLPR
WHMNDFFHSFLMVFRVLCGEWIESMWDCMEVAGQNMCMIVFLMVMVIGNLVVLNLFLALL
LSSFSADNLAPSDDDGEQNNLQIAVGRIKTGIAWAKVFVAEVMKKEEEEAEDEQKHLDEF
DEKLNCIANQKGIDINRELDYINGTTSGIGSSVGKYMIDEDHMSFIHNPNLTVCVPIAVG
ESDFDNLNTEDFSSESDVENSKDLDDTSSSEGSTIDIKPDVEEVVVVEVVEEFLDPDACW
TDECVAKYTFLYLPIDHGWGKHWWFLRKTSYLIVEHNWFETVIIFMILLSSGALAFEDVY
INKRKTIKIILEYADSVFTYIFILEMVLKWVAYGWVKYFTNAWCWLDFFIVDVSIITLIA
NAMGYSDLGPVKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIF
SIMGVNLFAGKYYYCFNETSEENFKPDVVNNKTECFALINANYSEVRWKNVKINFDNVAA
GYLALLQVATFKGWMDIMYAAIDSRKVEDQPIYEDNIYMYIYFVAFIIFGSFFTLNLFIG
VIIDNFNQQKKKFGGQDIFMTEEQKKYHTAMKKLGSKKPQKPIPRPLNNFQGLVFDFVTQ
QVFDISIMMLICLNMVTMMVETDDQSEETDNILYWVNFVFIVIFTTEFVLKLFALRHYYF
TIGWNIFDVVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLL
FALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDMYNFETFGNSMICLFMI
TTSAGWDGLLLPILNYPPDCDPQLENPGAPNTGDCGNPSVGIFFFVMYIIVSFLIVVNMY
IAIILENFGVATEESADPLSEDDFTTFYEIWEKFDPDASQFITYGKLGDFADYLEHPLRV
PKPNTIELISMDLPMVSGDRIHCLDILFAFTKRVLGDTGELDMLRDQMEQRFIAANPSKV
SYEPITTTLRRKQEDVSAKIIQQAYRNYLARRGFKRKRRPASNNNVKNGGTNPEKEKKEG
TPSTASLPSYDSVTKPDKEKQDENEGKGGKKEARNQKAVRESKC
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcatgagcaccattttgaccaactgtgttttcatgacgtttagtgatcctcca
gaatggaacaagatagtagagtataccttcacaggtatctacaccttcgaatcgcttacc
aagattgtggcgcgaggcttttgtatagacgggttcacttttctacgagatccatggaac
tggctggacttcatggtgatctctatggcatatgtaacagaatttgtggacctggggaat
gtctcggcgctgagaacgttcagggttctccgagcattgaaaactatttcagtcattcca
ggactcaagaccatcgtcggtgctctagttcaatcggtgaagaaattgtcagacgttatg
atcctcacggtcttctgtctcagtgtcttcgccttgattggactacagctcttcatgggc
aacctgcggcagaaatgtgtcatctggccaatcaactccactgagaacttcctggccaat
ggcagtaagggcttcgactggaacgaatacatcatgagcgagaggaatttctatttcatt
cctgggcagctggatgctctactgtgtggaaacagctcggactcagggcggtgccctgag
ggctacacgtgtatgaaggccgggagaaacccaaactacgggtacaccagctttgacagc
ttcggctgggccttcctcactctcttccgcctcatgacccaagacttctgggagaacctc
tacatgctgacactgcgagcggcagggaaaacctacatgattttctttgtgttggtgatc
ttcgttggatccttctacctggttaatctgattctggctgtggtggccatggcctatgag
gagcagaaccaggcgacgatagaggaggccgagcagaaagaggcagagttcaaagccatg
ctggagcagatcaagaaccagcaagaggatgcacaggctgctgccatggcgacctcggcg
ggcatggtgtcggaggccgacggggtggaggggggcgatgcaacagagggtggaggtcac
ctatcccgtagctcctctgatgcatccaagcttagctccaagagcgccaaggatcgacgc
aatcgcaagaagaagtctcgtcagaaggaggaggagaagaaagagaagggggagaaaggc
gagaaggtcgaccacgagaagcacgttaagtccgagtcggacgatggcagcaggaggagc
atcttccgtttcccaggcaaccggctgggacgcaagtcgtccatcatgaaccagtctctc
ctctccatcccgggctcgcccttcatgtcgcgccacaacagccgcagcagcatcttcagc
ttcaacaagggccgcccacccaaggacgtgggctcggagaacgagtttgccgacgacgag
cacagcacggtggaggagagtgaggaccgccggggctccctgttcatcccctaccgccgc
agcagctacagcggctacagccagggctcatcgcgcctcatcaacccactagcgccccac
attggagggaagaggaacagcacggtggactgcaatggcgtagtgtcactcatcgctcac
cagcccggcgggagccttctgcctgagaccacagaggtggaggggaagaagaaacactca
ggctccctgatggtctctgtggaccagctcagccgcaacaaggaccggaccaacagtgtg
atgagcgtggcgacacatacacactcacatactctgctggaggagctagaagattctcaa
agggcatgtccatcatggtggtataagtttgccaacctcttctgtgtgtgggactgcttt
cccttctggctgaagatcaagtatgtgctcaacctgatcgtcatggacccttttgtagat
ctggccgtcaccatctgtatcgtcctcaacaccctcttcatggccatggagcactacccc
atgactcctcgctttgatgagacgctgtcagtgggcaatctggttttcactggtatcttt
gctggtgagatgtttgccaagctggctgccatggatccatactactacttccaggaaggc
tggaattgttttgacagcttcatcgtgaccctcagtttagtcgagctggtattggctgac
attgagggtctgtctgtgctcaggtcattccgattgctgagagtgtttaagctggccaag
tcgtggcccacactcaacatgctcatcaaaatcattcactcttctgtgggagccctggga
aacttgaccttggtgctggcccttatcgtcttcatcttcgccgtggttggcatgcaactg
tttggaaagaactacaaggactgtgtttgtaagatcgcaataagctgtaagctgccccgt
tggcacatgaatgacttctttcactcatttctcatggtgtttcgggttctgtgcggggag
tggatcgagtccatgtgggactgcatggaggtggccggccagaacatgtgcatgatcgtc
ttcttgatggtcatggtcataggcaacttggtggtgttgaacctgttccttgccttgttg
ctgagctcgttcagcgcagacaacctggcaccctcagacgatgacggagaacagaacaac
ctgcaaatagccgtcggtcgaataaagacggggattgcctgggccaaggtctttgtagcc
gaggttatgaagaaggaggaggaagaagcagaggatgagcagaagcatcttgatgagttt
gacgagaagcttaactgcatcgcgaaccagaagggcatagacatcaaccgcgagctggac
tacatcaatggcactaccagtggtattggcagcagcgtgggcaagtacatgatcgacgag
gaccacatgtccttcatccacaatcctaacctgaccgtgtgtgttcccattgcggtcggg
gagtcagatttcgataacctcaacacagaggacttcagcagcgagtcggatgtggagaac
agcaaagacctggatgacactagctcttcggagggcagcaccatagacatcaagcctgac
gtggaggaagtggtggtggtggaggttgtggaggagttcctggacccagatgcctgctgg
acagatgaatgtgttgccaagtacacgtttttgtacttgcccatcgaccatggctggggg
aagcattggtggttcctgagaaagacaagctacctgattgtggagcataactggtttgag
accgtcatcatcttcatgatccttctcagtagcggggcgttggcctttgaggatgtgtac
ataaataagaggaagaccattaagattatcctggagtatgcagacagcgtgttcacctat
atcttcatcctggagatggtgctcaaatgggtggcctatggctgggtcaaatacttcacc
aacgcctggtgttggctggacttcttcattgtggatgtgtctataatcactcttatagct
aatgcgatgggctactccgatctagggcccgttaaatcactacggacattgagggcattg
aggccccttagggccctgtctcgttttgaagggatgagggtggtggtgaatgccttggtg
ggagccatcccctccatcatgaatgtgctgctggtgtgcctcatcttctggctcatcttc
agtatcatgggggtcaacctgtttgcagggaagtattactactgcttcaacgagacctca
gaggagaactttaaaccggacgtcgtcaacaacaagacagagtgctttgcactaatcaac
gcaaattacagtgaggtcagatggaagaatgtcaagattaactttgacaatgtggctgca
ggatacctggcacttcttcaagtggccacgtttaaaggctggatggacataatgtatgct
gccattgattctcggaaggtggaggatcagccgatctatgaagacaacatctacatgtat
atctactttgttgccttcatcatctttggctctttctttaccctcaatctcttcattggt
gtcatcattgacaactttaaccagcaaaagaaaaagtttggaggtcaggatatattcatg
acagaggagcagaagaaataccacactgccatgaaaaaacttggctcaaaaaaaccacaa
aaacctataccaagaccattgaataactttcagggcctggtatttgacttcgtaacgcag
caggtgtttgatatatctattatgatgttgatctgcctcaacatggtgaccatgatggtg
gagacggacgatcagtcagaagaaactgacaacatcctctactgggtcaactttgtcttt
attgttatttttactactgagtttgtgttaaagctctttgcccttcggcactactacttc
accattgggtggaacatctttgacgtggtcgtggtcattctctcaattgttggcatgttc
ctcgcagatatcattgagaagtactttgtctctccaaccctcttcagggtgatccgactg
gcccgaatcggcagaatcctgcgtctgatcaaaggggccaagggcattcggactttactg
tttgctctgatgatgtcacttcctgccctgttcaacatcgggttgttactcttcctggtt
atgttcatcttctctatctttggcatgtctaactttggctatgtcaagcatggggcagga
atcgacgacatgtacaactttgagacatttggcaacagcatgatctgcctgtttatgatc
actacgtctgccggctgggacggtttgttgttacccatcctcaactacccaccagactgt
gacccacaactggagaacccaggtgcaccaaatacgggtgactgcggcaacccctcagtt
gggattttcttttttgtcatgtatattatcgtctccttcctaatcgtggtcaacatgtac
attgccattatccttgagaacttcggcgttgcgactgaagagagtgccgacccgctcagc
gaagacgacttcacgaccttctacgaaatatgggagaagttcgacccagacgcctcgcag
ttcatcacctatggcaagcttggagactttgcagactacctcgagcacccgctccgtgtt
ccaaagcccaacaccatcgagctgatctccatggacttgcccatggtgagcggggaccgg
atacactgcctcgacattctgtttgcattcaccaaacgggtactaggcgataccggagag
ctggacatgctgagggatcaaatggaacaacgctttattgcggcgaacccgtccaaagtg
tcttatgaacccattaccactactctgaggcgcaagcaggaggacgtgtcggccaaaatc
atacagcaggcctaccgaaactacctggctagacgcggcttcaaacgcaagcgcagacct
gccagtaacaataatgtgaagaatggggggacgaatccggaaaaggaaaagaaggagggc
acgccctccactgcctctctcccctcctatgacagtgtaaccaaacctgacaaggaaaaa
caggatgagaacgaaggaaagggagggaagaaggaggccagaaaccaaaaagccgtcagg
gaatctaagtgttag
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integrated database retrieval system
