Oncorhynchus kisutch (coho salmon): 109895288
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Entry
109895288 CDS
T09179
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109895288 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109895288 (vps35)
Membrane trafficking [BR:
oki04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
109895288 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
109895288
NCBI-ProteinID:
XP_031686603
Ensembl:
ENSOKIG00005033964
UniProt:
A0A8C7IVS0
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All DBs
Position
LG8:59123123..59137204
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AA seq
798 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQLEGEDAMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVEKY
KQIVLSGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNLFLRSCADLHQHVNVKNI
IIALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQL
KHFPPLFEYFDYESRKSMSCYVLSNTLDYNTTIIAQEQVDAILTLVSTLIQDQPDQPAED
PDPEDFAEEQSLVGRFIHLLLSDDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQ
LAFRYKENSSSDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERTKCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSICAHLFWSGRNTEKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYVCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPEAEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccacacagcagtcaccccaggacgagcaggaaaagctacttgatgaagccgtg
caggctgtcaaggtccagtcatttcagatgaaacgttgcctggacaagaacaagctgatg
gatgcattgaaacatgcatctaacatgctgggcgaactcaggacctccatgttatcgcca
aagagctactatgaactctacatggccatctctgatgagctccactacctggaggtgtac
ctgacagatgagtttgccaagggcaggaaggtggctgacctctatgagctggttcaatat
gcagggaacatcatccccagactttacctgctgatcactgtgggggtggtgtatgttcgc
tccttccctcagtcgcgtaaggacatcctgaaggacctggtggagatgtgtcgtggggtg
cagcacccgctgagaggcctgttcctcagaaactacctgctgcagtgcacccgcaacatc
ctgcctgatgatggggagcagctagaaggggaggatgcgatgacgggagacattaacgac
tccattgactttgtgctgctgaattttgctgagatgaataagctgtgggtgcgcatgcag
caccagggccacagccgagacagggagaagagggagaaggagaggcaggagctgcgcatc
ctggtcgggaccaacctggttcgactcagccagctggagggggtcaacgtggaaaagtat
aaacagattgtgctgtccggtgtcctagagcaggtggtaaactgccgagattccctggct
caagaatatctcatggagtgcatcattcaggtcttccctgatgagttccaccttcagaca
ctgaacctattccttcgttcctgtgccgacctgcatcagcacgtcaatgtcaaaaacatc
atcatcgctctcattgacagactggctttgtttgctcaccgagaagatggacctggaatc
cctgctgaaatcaaactgtttgatattttctcccaacaagtagccacagtaatacagtcc
cgccaggacatgccttcggaggatgtggtctcactacaggtgtccctcatcaacctggca
atgaagtgctaccctgaccgggtggactatgtggacaaggtcttggagagcacagtggag
atcttcaacaagctcaacctggaacacattgcaaccagtagcgcggtctcaaaagaattg
actagattgctgaagatcccagtggacacctacaacaacattctgactgttctgcagctc
aagcacttccctccgctcttcgagtactttgattatgagtcccgcaaaagcatgagctgt
tacgttctgagcaacactctggactacaacaccaccattatagcccaggagcaggtggat
gccatcttgaccctggtgtcgacactgatccaggaccagccagaccagcccgctgaagac
cccgacccagaggactttgctgaggagcagagccttgtgggtcgctttatccatctgctg
ctttccgacgaccccgaccaacagtatctgatcctgaatacagccaggaagcactttggt
gctggggggaaccagaggattcgctacactcttccaccgctggtgtttgctgcctatcag
ctggccttccgctacaaagagaactcttcatcagatgataaatgggagaagaagtgccag
aagatcttctcatttgcccaccaaaccatcagtgctctgatcaaggctgagctggctgag
ctgcccctcagactcttcctacagggggcgctggccgcaggagagattggcttcgagaac
cacgagactgtggcctacgagttcatgtcacaggccttctccctgtatgaggatgagatc
agcgactccaaggctcagctagcagccatcacgctgatcatcggcacgtttgagagaacg
aaatgcttcagcgaggagaaccacgaaccgctgaggacacagtgtgcactcgccgcctcc
aaactgctcaagaagccagaccagtgtcgggccgtcagcatctgtgcacacctcttctgg
tccggacgcaacactgaaaagaatggagaggagattcgtgacgggaagagggtgatggag
tgcttaaagaaggccctgaaaatcgccaaccagtgcatggacccgtcattgcaagtgcag
ctcttcattgagatcctgaaccgatacgtctgtttctacgaaagagagaatgatgcggta
acggtccaggttctgaaccagctgatccagaagatccgagaagacctaccaaacctggag
gccagcgaggagacggagcagatcaacaaacacttccacaacacactggagcacctgcgt
ctgcagagagagtcgccggaggccgagggacctgcttatgagggcctggtgctgtag
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