Oncorhynchus kisutch (coho salmon): 109895411
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Entry
109895411 CDS
T09179
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109895411
Transcription factors [BR:
oki03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109895411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
109895411
NCBI-ProteinID:
XP_020344659
Ensembl:
ENSOKIG00005035754
LinkDB
All DBs
Position
LG8:complement(65093297..65113407)
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AA seq
627 aa
AA seq
DB search
MNICGDLMADQRMDISSTMNEFLSPGSTDLISSIGTPGMDYTRKRKSSTTDYQIDDFSFE
DSMDTDNDRLGDHQGRIKNAREAHSQIEKRRRDKMNSFIDELAALVPTCNAMSRKLDKLT
VLRMAVQHMKTLRGAANPYTEANYKPAFLSDDELKHLILRASDGFLFVVGCDRGKILFVS
ETVYKILNFSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDSKTGLPVKTDIT
PGPSRLCSGARRSFFCRMKCNRPLIKMEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
TKMGLDDDNEPDNEGCNLSCLVAIGRLHPHIVPQPMNNEIRVKPTEYVSRHAIDGKFVFV
DQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKIKDGSF
ITLRSRWFSFMNPWTKEVEYIVSTNTVVCGSVPEGSDGIYPQLAASPQSMDSVLTDGNGK
RALQTVPGIPGGTRAGAGKIGRIIAEEVMEIQRIRGSSPSSCGSSPHIFTSTPPPDMSSP
GGKKIQNSGTPEHPSAGLIPGPDSVGYPYSNNSNLSDNSHIGIDIMDEPGSSSPSNDEAA
MAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttgtggtgatctaatggcagaccaaagaatggacatttcctccacgatgaac
gagttcttgtctcccggctccactgatctaatcagctcgatcggcacacccggcatggac
tacacacgcaagagaaaaagcagcaccacagactaccaaattgatgacttttcttttgag
gatagcatggacacagacaatgatagacttggtgatcatcaaggccggataaaaaatgcc
agagaggcccacagtcagattgagaagagacgcagggacaagatgaacagcttcatagac
gagctggccgccctagtgcctacatgcaacgctatgtcccgtaaactggacaaactaaca
gtcctgcgcatggctgtccagcacatgaagaccttaagaggtgctgctaacccctacact
gaagctaactacaaaccagccttcctgtcagacgacgaactgaagcacttaatactgagg
gcatctgatggctttctgtttgttgttggctgcgatcgagggaagatactgtttgtttcg
gagacggtctacaaaatcctaaacttcagccaaaatgacctgattggccagagcctattt
gattacctgcatcctaaagacattgccaaagtcaaggagcagctgtcctcatcggacacg
gcgccgcgggagcgcctcatcgattccaaaactggccttccagtaaagacagacatcacc
cccggcccatccagactttgctctggagccaggcgatccttcttctgcaggatgaagtgc
aatcggcccctcatcaaaatggaggacaaggacttcccatccacctgctccaagaagaaa
gctgaccgtaagagcttctgcacaatacacagtactggctacctgaagagctggccgcct
accaagatgggtctggatgacgacaatgaaccagacaacgagggctgcaacctcagttgt
ctggtggccattggacggctgcatccccacattgtccctcagccaatgaacaatgagatc
cgtgtcaagcccactgagtatgtctcgcgccatgccatcgacgggaagtttgtctttgtt
gatcagagggccactgccattttggcttatctaccccaagagttgctgggtacatcgttt
tatgagtactttcatcaagatgacatagggcaccttgcggaatgtcatagacaagtgctc
cagatgagggagaagatcaatacaaactgctacaagttcaaaataaaagacggctccttt
atcacgctgaggagtcgctggttcagttttatgaacccttggaccaaagaggtggagtac
attgtctccaccaacacggtcgtctgcggcagcgtgcctgaaggatctgatggcatctat
cctcagctcgccgcctccccccagagcatggatagtgtactcacagacggaaacgggaag
cgggcccttcagactgtgcctggcatccccggcggcacaagggcaggggcgggaaagatc
ggccggataatcgcagaggaggtgatggagatccagaggataagaggctcctcgccctcc
agctgtggctccagtcctcacatcttcaccagcactccacccccagacatgtcgtcccca
gggggaaagaagatacagaacagtggaactccagaacatccctcagcagggctgataccg
ggaccagactccgtaggctatccatactccaacaactccaatctaagtgataactctcac
attggcattgacatcatggatgagccaggctccagtagtccgagtaatgacgaggcagcc
atggctgtgatcatgagccttctggaggcagacgcagggttgggaggcccagtggacttc
agtgacctgccctggccactgtga
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