Oncorhynchus kisutch (coho salmon): 109895507
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Entry
109895507 CDS
T09179
Name
(RefSeq) cytoplasmic dynein 1 light intermediate chain 2-like isoform X3
KO
K10416
dynein cytoplasmic 1 light intermediate chain
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04145
Phagosome
oki04814
Motor proteins
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109895507
09142 Cell motility
04814 Motor proteins
109895507
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109895507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109895507
03036 Chromosome and associated proteins [BR:
oki03036
]
109895507
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109895507
Membrane trafficking [BR:
oki04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
109895507
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
109895507
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
109895507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DLIC
ABC_tran
Arf
AAA_22
AAA_16
SAP130_C
SRP54
AAA_29
AAA_7
ATPase
Roc
PduV-EutP
AAA_24
nSTAND3
G-alpha
AAA_14
Motif
Other DBs
NCBI-GeneID:
109895507
NCBI-ProteinID:
XP_020344812
Ensembl:
ENSOKIG00005024840
LinkDB
All DBs
Position
LG8:57486666..57506743
Genome browser
AA seq
494 aa
AA seq
DB search
MAPVLEKKFLGAAGAGDTMENSNEDEEGQNLWTSILSEVSTRSSSKLPSGKNILVFGEDG
SGKTTIMAKLQGAEHNKKGRGLEYLYLNVHDEDIDDLTRCNVWILDGDLYHKGLLKFAVT
AESLNDSLAVFVADMSRPWTIMESLQKWASVLRDHVDKLKIPPEEMREMEQRMVKAFQEY
TEPEGADPASPQRRAPPAGGDDEGVVLPLGENVLTHNLGIPVLIVCTKCDAVSVLEKEHD
FREEHFDFIQSHIRRFCLQYGAALIYTSVKEEKNMDLLYKYIVHKIYDFQFTTPALVVEK
DAILIPSGWDNEKKIAILHENFTTVRPEDPFEDFIMKPPVRKLVHDKEVNAEDEQVFLMK
QQSLLAKQPATPTRGSTESPGRTASGSPRPTGRTGPTNVASVSPMTAVKKPDPNMKGAAA
NEGVLANFFNSLLSKKTGSPGSPGTGAAGAGSPGSVKKTGQKPVLTDVHAELDRMTRKPD
SMVTANNTPTENEA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgttctggagaagaagttcctgggcgcagccggggcaggcgacactatggaa
aatagcaacgaagacgaggaaggacaaaacctatggacttcaattctcagtgaggtttca
acacgttcaagttctaaattgccatccgggaagaacatattggtgtttggtgaggatggg
tcaggaaagacaacgattatggcaaaactccaaggagcagagcacaataagaaaggaaga
ggcctggagtatctgtatctgaacgtccacgatgaggacatagatgaccttacacgctgt
aacgtgtggatcctggatggggacttgtatcacaaaggcctgctaaagtttgcagtgaca
gcagagtcgctgaacgacagcttggcagtgtttgtggcagacatgtcaagaccctggacc
atcatggagtcgctccagaagtgggccagcgtgctgcgtgatcatgtggacaagctcaag
atcccaccggaggagatgagagagatggagcagaggatggtgaaggctttccaggagtac
acagagccggagggagccgatccagcctctccccagagacgggctcccccagcagggggg
gatgacgagggcgtggtgctaccgctcggggaaaacgtactcacacacaacctgggcatt
ccagtgctaatagtttgcacaaagtgtgatgcagtcagtgttttagagaaggagcacgac
ttccgagaggagcacttcgacttcatccagtcccacatccgacgattctgcttacagtat
ggagctgcattgatttacacctctgtcaaagaggagaagaacatggacctcctatataaa
tacatagtgcacaaaatatacgacttccagttcaccacgcctgccttagtggtggagaag
gatgctattttgattccatctggatgggacaatgagaagaagattgcaattctgcatgaa
aatttcacaacggtgagacctgaagacccctttgaagacttcatcatgaagcctccagta
cgaaagctggttcatgataaggaggtcaacgcggaggacgagcaggtgttccttatgaag
caacagtctttgctggccaagcagccggccacaccaacaagaggatcaacagaatctcct
ggacgaaccgcttctggctcgcctcgacccactggccgtacaggccctaccaacgtggcc
agcgtctcgccaatgaccgcggtcaagaaacctgaccccaacatgaagggagcagcagca
aacgagggagtgctggccaacttctttaacagccttttgagtaaaaagactgggtcccct
gggagtccaggcaccggagctgcgggagcaggatctccaggatcagtcaagaaaacaggg
cagaagccggttttgactgacgtccacgcagagttggatagaatgactcgcaaaccggac
tccatggttacagctaacaacacaccgacagagaacgaagcgtga
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