Oncorhynchus kisutch (coho salmon): 109895525
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Entry
109895525 CDS
T09179
Name
(RefSeq) autophagy-related protein 13-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04136
Autophagy - other
oki04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109895525
04136 Autophagy - other
109895525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109895525
03029 Mitochondrial biogenesis [BR:
oki03029
]
109895525
Membrane trafficking [BR:
oki04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109895525
Atg1 complex
109895525
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109895525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
109895525
NCBI-ProteinID:
XP_020344837
Ensembl:
ENSOKIG00005021783
LinkDB
All DBs
Position
LG8:56945932..56958329
Genome browser
AA seq
512 aa
AA seq
DB search
MMDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKVCTRSLSSPTGSDWFNLAIKDIP
EVTHESKKALAGQLPGIERSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYN
RMSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLTGLGEGFQTVRVGVVGTP
IGTITLSCAYRTNLAFMSTRQFERTAPIMGIIIDHFVERPFGNVGHMHPCNYRAPGEDEG
AYNGVEDSQEVCTTSFSTSPPSQLYCSRLSYQSPVLVGAADFCHPSTLNAANPHQMGVPG
KEGGVPQQVPVQPCHGAQAEHRRVSSCPPADHVPATPSSSGEDAETSSRSVGVKSGSPCG
VLETTFTRKVGAFVNKPGTQVTTASLDLPFAAFAPRAYDLEENDPMVQPPESSATSSPLQ
GSLHSQGSGESGGPAQDDFVMVDFKPAFSKDDLLPMDLGTFYREFQNPPQLTSLTIDVSS
QSMAEDLDSLPEKLAVYEKNIDEFDAFVDTLQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagtgatctaagtcctcaggataaaaaagacttggacaagttcataaagttt
ttcgctttgaagacagtacaggtgatagtccaagctcgacttggggaaaaagtatgcaca
cgctccttgtcttcacctactggctctgattggttcaacctggcaatcaaagatatccca
gaagttacacatgagtcaaagaaagctctggccgggcagcttcctggcatcgaacggtcc
atgtgtgttgagatctccctcaaaacctcagagggagactcgatggaattggagacatgg
tgtctcgaaatgaacgagaagtgtgacaaagatattaaagtgtcctacactgtctataac
cgcatgtcattactgctcaagtcactactggctatcacaagggtaaccccagcctacaaa
ctctcacgaaagcaagggcacgactatgtcatactgtacaggatatattttggagaggtt
caacttacaggattgggagaagggttccagacagtgcgtgtaggagttgtgggaactcct
attggaaccatcaccttatcttgtgcttacaggacaaacctggccttcatgtccaccagg
cagtttgagaggacggctccgattatgggcataatcattgaccacttcgttgagcgcccc
tttggcaacgtgggacacatgcatccatgtaactacagagcacccggagaagatgaagga
gcatacaatggggtggaggattctcaggaagtgtgcaccacgtccttctccacttctcca
ccctcacaactctactgctctcgtctttcttatcagtctcctgtgcttgttggagctgct
gacttctgccacccctctaccttaaacgctgccaacccacaccagatgggagttccaggg
aaggagggcggcgtaccccagcaggtccctgtgcagccttgtcatggagcccaggcagag
catcgacgagtgtcctcatgcccccctgctgatcatgttcccgccacgccctccagcagt
ggtgaggacgcagagacctcgtcgaggagcgttggggtgaagagtggctctccctgtggt
gtactggagaccaccttcaccaggaaagtgggtgcctttgtcaacaagccaggcacacag
gtaaccacagcaagcctggacttaccatttgcagcgtttgctcccagagcctatgacctc
gaggaaaatgaccctatggttcagccgccggagtcctcagccacgtcctctcccctgcag
ggcagtttgcactcccaaggctctggtgagagtggaggcccggcacaggacgactttgtt
atggtggactttaagcctgcgttctccaaggatgacctccttcccatggaccttggcaca
ttctacagagagttccagaaccccccacagctcaccagcctcactattgatgtcagttct
cagtccatggcagaagacctggactctcttcctgaaaaactggcagtatacgagaagaac
atcgatgaatttgatgcatttgtggacacattgcagtag
DBGET
integrated database retrieval system
