Oncorhynchus kisutch (coho salmon): 109895566
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Entry
109895566 CDS
T09179
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109895566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oki03009
]
109895566
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109895566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_THOC3
Utp12
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SPT8
EIF3I
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_ACSF4
WD40_2
Beta-prop_HPS5
Beta-prop_RSE1_2nd
NBCH_WD40
Beta-prop_IP5PC_F
Tricorn_2nd
Beta-prop_SCAP
SGL
MinC_C
Motif
Other DBs
NCBI-GeneID:
109895566
NCBI-ProteinID:
XP_020344937
Ensembl:
ENSOKIG00005012656
LinkDB
All DBs
Position
LG8:51889102..51925454
Genome browser
AA seq
636 aa
AA seq
DB search
MAAVGGSSSLGLPCVFSPKSRQYLALCAQDGRLRIWNTDIKTLNQEYVPSAHLSATCTCI
SWGPCRKAKEGPQRKKRKSEAGQVENQVDLLALGTAAGSVIIYSTVKGALHCTLDGSHSG
VVNCVQWHPEDCLLYSGSDDTHIVEWDLQTGKARCKWKADRAPVTSLCVSPDGKLLLSAG
HTIKMWDLETKEVYRKFTGHSTAVTTLRFATTRPPDSDGLYFLSGAAHDRLLSVWQVRED
GKDKNSVVSFNLTDEPHHIDLFTSNSKEEALRLAVVCKDGQLHLFEHFLNGPCKKPLSPL
CTVQMTGVEDSPIPVPLLAAALTTDTHSLLLAYGNHLQPVMERVEVNTAERHVCLTRDVH
TTLSLTMETTVSKVKTPVVNAKSKVVVPGLPGHQAPVKGALGSEKRKGTDAKEMSIEERL
GKIEMSSEKAVKGAPSLQTDNFAVLLVQGLESKDANILNKVFQTRKDMLIKKTVARVPLP
AVLPLVEEITKRMQGHPYTAVLMVRWLKAVLMQHTSYLASLPDLMFQLGVLYHMIESRVK
MFHKLTKLHGKLYLLMTQVATSSNEVKDVDHTAKLVYEEESSDEDNASGDEGLPDEDSDN
WEEDETKEDKVEEGMRMESKVTGDSDIEPGNESEEE
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgttggaggtagttcttctttggggctaccctgtgttttctctccaaagtca
cgtcaataccttgctttatgtgctcaggatggcagacttcgtatttggaacacagatatt
aaaacacttaatcaagagtacgtgccttcagcacacttgagtgccacttgtacctgcata
tcttggggaccatgccgaaaggccaaggagggacctcagcggaagaaaaggaaatctgag
gcaggacaggtggagaatcaggtggacctgttggctctgggcacggctgcgggcagcgtt
atcatctacagcacagtgaaaggagcactgcactgtacactggatggaagtcacagtggt
gtggtgaactgtgtgcagtggcaccctgaggactgcctgctgtacagtggctcagacgac
acacacatcgtagagtgggacctacagacgggcaaggcgcgctgtaagtggaaggctgat
cgtgccccagtgaccagtctgtgtgtgagtccggatggcaagctgctgctctcagcggga
cataccatcaagatgtgggacctcgagaccaaggaggtgtaccggaagttcacaggtcac
tccacagcggtgacgaccctgcgcttcgccaccacacgccccccggatagtgacggcctc
tacttcctctccggcgcagcccacgacagactcctcagcgtgtggcaagtccgggaggac
ggcaaggacaagaactcagtggtgtccttcaacctgactgacgagcctcaccacatagac
ctcttcacctccaacagcaaggaagaggcgttgaggctagcagtggtgtgtaaagacggc
cagcttcatctctttgagcattttttgaacgggccctgtaagaagcccctgtccccgttg
tgtacagtgcagatgactggggtggaggacagccccattcccgttcccctgttggctgcg
gccctcactacagacacacacagcttgctgctggcctacggcaaccacttgcagcctgtc
atggagagagtggaggtgaacacggcagagagacatgtttgcctgacccgtgatgtccac
accaccctctccctcaccatggaaaccacagtctccaaggtgaaaaccccagtagttaat
gccaagagcaaagttgtcgtccctgggcttcccggtcaccaagcgccggtcaaaggagcc
ctgggatccgagaagagaaagggcacagatgccaaagagatgtctatagaggagcgactg
ggcaagattgaaatgtcatctgaaaaggctgtcaagggggccccttctctacagaccgac
aactttgcggtgctgctggtgcagggcctggagagcaaggacgccaacatcctcaataaa
gtgtttcagacccggaaggacatgttgataaagaaaacagttgcgcgggtacccctccct
gccgtcttgccattggtggaggagatcaccaagagaatgcaagggcatccatacacggca
gtgctgatggtgcgatggctcaaggcggttctcatgcagcacacctcctacttagcctct
ttgccagacctgatgtttcagctgggagtactgtaccacatgattgagagtagagtcaag
atgttccacaagctgaccaagctgcacggcaagctctatctgctcatgacacaggtggcg
acaagcagcaacgaagtcaaagacgtggaccacacggccaagcttgtctatgaagaggag
tcctctgatgaagacaatgcttcaggtgacgaaggtcttccagatgaggattctgataac
tgggaggaggatgagactaaggaagacaaggtggaggaaggcatgaggatggaatcaaaa
gtgactggcgattctgacatagaaccggggaacgagagcgaggaggagtga
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