KEGG   Oncorhynchus kisutch (coho salmon): 109895566
Entry
109895566         CDS       T09179                                 
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    109895566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oki03009]
    109895566
Ribosome biogenesis [BR:oki03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    109895566
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_THOC3 Utp12 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SPT8 EIF3I Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_ACSF4 WD40_2 Beta-prop_HPS5 Beta-prop_RSE1_2nd NBCH_WD40 Beta-prop_IP5PC_F Tricorn_2nd Beta-prop_SCAP SGL MinC_C
Other DBs
NCBI-GeneID: 109895566
NCBI-ProteinID: XP_020344937
Ensembl: ENSOKIG00005012656
LinkDB
Position
LG8:51889102..51925454
AA seq 636 aa
MAAVGGSSSLGLPCVFSPKSRQYLALCAQDGRLRIWNTDIKTLNQEYVPSAHLSATCTCI
SWGPCRKAKEGPQRKKRKSEAGQVENQVDLLALGTAAGSVIIYSTVKGALHCTLDGSHSG
VVNCVQWHPEDCLLYSGSDDTHIVEWDLQTGKARCKWKADRAPVTSLCVSPDGKLLLSAG
HTIKMWDLETKEVYRKFTGHSTAVTTLRFATTRPPDSDGLYFLSGAAHDRLLSVWQVRED
GKDKNSVVSFNLTDEPHHIDLFTSNSKEEALRLAVVCKDGQLHLFEHFLNGPCKKPLSPL
CTVQMTGVEDSPIPVPLLAAALTTDTHSLLLAYGNHLQPVMERVEVNTAERHVCLTRDVH
TTLSLTMETTVSKVKTPVVNAKSKVVVPGLPGHQAPVKGALGSEKRKGTDAKEMSIEERL
GKIEMSSEKAVKGAPSLQTDNFAVLLVQGLESKDANILNKVFQTRKDMLIKKTVARVPLP
AVLPLVEEITKRMQGHPYTAVLMVRWLKAVLMQHTSYLASLPDLMFQLGVLYHMIESRVK
MFHKLTKLHGKLYLLMTQVATSSNEVKDVDHTAKLVYEEESSDEDNASGDEGLPDEDSDN
WEEDETKEDKVEEGMRMESKVTGDSDIEPGNESEEE
NT seq 1911 nt   +upstreamnt  +downstreamnt
atggcggctgttggaggtagttcttctttggggctaccctgtgttttctctccaaagtca
cgtcaataccttgctttatgtgctcaggatggcagacttcgtatttggaacacagatatt
aaaacacttaatcaagagtacgtgccttcagcacacttgagtgccacttgtacctgcata
tcttggggaccatgccgaaaggccaaggagggacctcagcggaagaaaaggaaatctgag
gcaggacaggtggagaatcaggtggacctgttggctctgggcacggctgcgggcagcgtt
atcatctacagcacagtgaaaggagcactgcactgtacactggatggaagtcacagtggt
gtggtgaactgtgtgcagtggcaccctgaggactgcctgctgtacagtggctcagacgac
acacacatcgtagagtgggacctacagacgggcaaggcgcgctgtaagtggaaggctgat
cgtgccccagtgaccagtctgtgtgtgagtccggatggcaagctgctgctctcagcggga
cataccatcaagatgtgggacctcgagaccaaggaggtgtaccggaagttcacaggtcac
tccacagcggtgacgaccctgcgcttcgccaccacacgccccccggatagtgacggcctc
tacttcctctccggcgcagcccacgacagactcctcagcgtgtggcaagtccgggaggac
ggcaaggacaagaactcagtggtgtccttcaacctgactgacgagcctcaccacatagac
ctcttcacctccaacagcaaggaagaggcgttgaggctagcagtggtgtgtaaagacggc
cagcttcatctctttgagcattttttgaacgggccctgtaagaagcccctgtccccgttg
tgtacagtgcagatgactggggtggaggacagccccattcccgttcccctgttggctgcg
gccctcactacagacacacacagcttgctgctggcctacggcaaccacttgcagcctgtc
atggagagagtggaggtgaacacggcagagagacatgtttgcctgacccgtgatgtccac
accaccctctccctcaccatggaaaccacagtctccaaggtgaaaaccccagtagttaat
gccaagagcaaagttgtcgtccctgggcttcccggtcaccaagcgccggtcaaaggagcc
ctgggatccgagaagagaaagggcacagatgccaaagagatgtctatagaggagcgactg
ggcaagattgaaatgtcatctgaaaaggctgtcaagggggccccttctctacagaccgac
aactttgcggtgctgctggtgcagggcctggagagcaaggacgccaacatcctcaataaa
gtgtttcagacccggaaggacatgttgataaagaaaacagttgcgcgggtacccctccct
gccgtcttgccattggtggaggagatcaccaagagaatgcaagggcatccatacacggca
gtgctgatggtgcgatggctcaaggcggttctcatgcagcacacctcctacttagcctct
ttgccagacctgatgtttcagctgggagtactgtaccacatgattgagagtagagtcaag
atgttccacaagctgaccaagctgcacggcaagctctatctgctcatgacacaggtggcg
acaagcagcaacgaagtcaaagacgtggaccacacggccaagcttgtctatgaagaggag
tcctctgatgaagacaatgcttcaggtgacgaaggtcttccagatgaggattctgataac
tgggaggaggatgagactaaggaagacaaggtggaggaaggcatgaggatggaatcaaaa
gtgactggcgattctgacatagaaccggggaacgagagcgaggaggagtga

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