KEGG   Oncorhynchus kisutch (coho salmon): 109895594
Entry
109895594         CDS       T09179                                 
Name
(RefSeq) ataxin-2-like isoform X11
  KO
K23625  ataxin 2/2L
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109895594
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109895594
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 109895594
NCBI-ProteinID: XP_020345015
Ensembl: ENSOKIG00005035911
LinkDB
Position
LG8:complement(47732164..47760981)
AA seq 1058 aa
MSMKQAGGNRKPGGGAAAGAGRQNLGRGRHSTKGTSAAVVFNGVYANMRMVHVLTSVVGS
KCELKVKNGLVYDGVFKTYGPECDLVLDAAHRKIPKPSEGPRQEDIVESIIFKASDVVVV
HFRDVDLNFASKNNFTDTAVSGRINGEHKEKDLEPWDGGEQQQHVVSGSLESLDTDVSNG
WDPNDMFKYNEEQYGIMSTYDSSLSSYTVALERDNSEEFLKREARAAQLAQEIEASATYK
ARVALENDERTEEEKYSAVVRGEKGERGEREPHTLNRENKYIPPGQRNREGMSWGVGRQN
SPKLIQSSSGPPRPGPHDYSPSSGADQRVVNGGTTSWPSPCPSPSLRPPFCYQSGPSSLP
TRVATPTRPPSRPPSRASRPSSHPSAHGAPALISTMPNRRMSSEGPPRMSPKTQRTPRTH
RVPPGGRVPPGVDFMPHNAPGEVPVPPPTRSTSSGGTWSSVVSGAHRPRSPRQNSMGGAS
PGPSSLPLAQTGTTPVEPATTQSAPSPTAASPARDMAATPSEAKESRVQEMRQNSPTANK
ENMKPLESPPSISRPLSKGPPSMAPDHRKQIDNLKKFSVDFRLQSSSNPDPQFEQMTKPP
PDAAGEKPKELPLDKGLDGSEEGNVAPTGSSKAGSPGAPSSSTLCPAPEQKRGPDVTSQG
VQTSAPTFSGGAKPEDKEENEPVKDQIIKSTLNPNAHEFKPRVFNTQHKPATTPTPPRPQ
GQPSPSIVVQQPQQVYSQTVCFPQMYPLTPVSPGVQSPAMYHVQMPHMTVSQSKPYRPGK
VANMPQQRSDQHHPQGTPTMMHPAQAAGPPIVAQSPTYSAQYFTCSPQQFTSQQLMQQMP
HYQSQAQHVFSPVMHSQARMMAPPNHGQPGQLVSSTTQYGEQTHTMYVSQGPMPQQYQHP
QPSATPTGQAQQGGQHGGNHPAPSPVQQHQAAAAQALHMGNQPQQQMYQALAPTPPSMTP
GTNPQSPQGSFPSAQQAVYLHPQQMQHGYNPSHMAHMQQAHMQSGMVPSHPSHPQMMLMA
TQQPGGPQLPQNALNPIPVSSTTHFSYLAHPQVQQHHQ
NT seq 3177 nt   +upstreamnt  +downstreamnt
atgtcaatgaagcaggccggtggtaatcgcaaacccggcggtggtgcagccgctggggcc
ggacgacagaatttgggcaggggacggcatagtaccaaaggtacttcggcagcagttgtc
ttcaacggtgtatatgcaaacatgaggatggtccatgtcttgacatcagtagtgggatcc
aaatgcgaactgaaggttaaaaatggattggtttatgacggagtgttcaaaacatatggc
ccagagtgtgacctggtcctagatgcagcccacaggaagatccctaaacccagcgagggc
ccgcgacaggaagacattgtggaaagcatcatcttcaaggcttctgacgtggtggtggtg
cacttcagagacgtggacctcaattttgccagtaaaaacaacttcacggatacggcggtg
agtggcagaatcaacggggagcacaaggagaaggacctggagccgtgggatggaggggag
cagcagcagcacgttgtctcaggcagcctggagtccctggacacagacgtgtctaatgga
tgggacccgaatgacatgttcaagtacaacgaagagcagtatggcatcatgtcgacctac
gacagcagcctgtctagctacactgttgccctggagcgggataactcagaggagttcctg
aagcgggaggcacgggcagcccagctggcgcaagagattgaggccagcgccacctacaag
gcccgcgtggccctggagaatgacgagcgcaccgaggaggagaagtactcagccgtggtg
cgcggagagaagggagagcgtggagagcgggagccacacacactcaacagagaaaacaag
tacattcccccgggccagaggaacagagaggggatgtcatggggagtgggtcgtcagaac
tcccccaagttgatccagagcagcagcggacctccgcggccaggtccccatgactacagc
cccagttctggagccgaccagcgggttgtcaacggaggtaccacctcgtggccatctccc
tgcccatctccctccttgcgtcctcctttttgctaccagtcagggccctcctctctccca
accagggtggccacacccacccggcctccctccagacctccctcgcgggcttcccggccc
tcgtctcacccctccgctcacggcgctccagctctcatctccactatgcccaatagacgc
atgtcctctgaaggccctcccaggatgtcaccgaagacacagcgcaccccacgcacccac
agagttccccctgggggtagagtccctccgggagtagactttatgccccacaatgctcca
ggagaggtgcctgtgccccctccaacccgcagcacctcttccggtggcacctggtcttcc
gtggtcagcggagcacacaggcctcgctcccctcggcagaacagcatgggcggggcctcc
cctggcccttcctccctccccttggcccagactgggaccacccccgtagaacctgctacc
acgcagtcagccccatcacctactgctgctagccctgcccgggatatggccgccactccc
tcagaggcaaaagagtctcgggtccaggagatgagacagaactcccctacggccaacaag
gagaacatgaagcccctggagagcccccctagtatcagcagacccctctctaaaggaccc
ccctccatggcaccagaccacagaaaacaaatagacaacttaaagaaatttagtgttgat
tttaggttgcagtccagctccaacccagatccacagtttgagcagatgaccaagcctcca
ccagatgccgcgggagagaagcccaaggagcttcccctggacaagggtttggatgggtct
gaggagggcaacgtggcccccaccgggagcagcaaggcaggcagccctggagcaccatcc
tcctctaccctctgtcctgccccggagcagaagagggggcctgacgtgacctcgcagggt
gtccagacgtctgcacccaccttcagcggaggggccaagcctgaggacaaagaagaaaat
gagccagtcaaagatcaaatcataaagtcgactctcaatcctaatgcccatgagttcaaa
cccagggtgttcaatactcagcacaaaccggccaccactccaacccccccgcggccacag
ggccagcccagcccctccatcgtggtgcagcagccccaacaagtctacagccagacggtc
tgcttcccccagatgtaccctctgaccccagtcagccctggagttcagtctccagccatg
taccatgtccagatgcctcatatgacggtgagccagtccaagccctacagaccaggtaaa
gtagccaacatgccccagcagaggtcagaccagcaccacccccagggcacacccacaatg
atgcacccagcccaagccgcggggccgcccattgtggcccaaagccccacctattcagcc
cagtacttcacctgcagcccacagcagtttaccagccagcaactgatgcagcagatgccc
cactaccagtcacaggcccagcatgtgttcagcccggtgatgcacagtcaggccaggatg
atggcccctcccaaccacggccagcccggccagctggtctcctccaccacccagtatggc
gagcagactcacaccatgtatgtgtcacaaggccccatgccgcagcagtaccagcacccc
caaccctcggccacgcccacaggccaggcccagcagggcgggcagcatgggggaaaccac
ccggctcccagccccgtccaacagcaccaggctgcagccgcccaggccctgcacatgggc
aaccagccccagcagcagatgtaccaggccctggcccccaccccgccctccatgaccccg
gggaccaacccccagtccccccagggcagcttcccctcggcccagcaggccgtctacctc
cacccccagcagatgcagcacggctacaacccctcccacatggcccacatgcagcaggcc
catatgcagtctgggatggttccctcccaccctagccaccctcagatgatgctgatggcc
acccagcagccaggcggcccccaactcccccagaatgccctcaaccccatcccagtgtcc
tccactacacacttctcttacttggcacacccccaagtgcaacagcaccatcagtag

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