Oncorhynchus kisutch (coho salmon): 109895597
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Entry
109895597 CDS
T09179
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
oki
Oncorhynchus kisutch (coho salmon)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
109895597
NCBI-ProteinID:
XP_020345019
Ensembl:
ENSOKIG00005035496
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Position
LG8:complement(47471638..47564210)
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AA seq
1012 aa
AA seq
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MRSEALLLYFTLLKIARAGFPEDSEPISISHGNYTKQYPAFFGHKPGRNNTQRHKLDIQL
IIIMNRTLYIAARDHIYTLDTDTVNSEEIFFNKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLQQNDDTLFVCGTNAFNPSCRTYKMDTMEHLGEEISGMARCPYDAKHSNIALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKCLKEPYFVQAVNYGDFIYFFYREIA
MEYNTMGKVVFPRVARVCKNDRGGSQRVLEKQWTSFLKTRLNCSIPGDSHFYFNILQAVT
DVIHINGRDVVMATFSTPYNSIPGSAVCAYDMAEVANAFMGRFKEQKSPDSTWTPVPEDK
VPKPRPGCCAGTPSLEKYKVSNEFPDDTLNFIKQHPLMDEAVPSIANRPWFLKTMVRYRL
TRISVDNAAGPYRNHTVVFLGSEKGIILKFLAKMNSGLLNDSLFLEELNVYNPEKCSIDG
VDDKRIVSMQIDNQGHSLFVAFTSCVVKVPLSRCERHGKCKKSCIASRDPYCGWVSEGAC
RQVVLDPKSAFEQDVEHGNTDGLGDCQNTFVALNDVQSSPHGHERARHDHPTLPFPTTAH
PPAGGPLGRGGMVEQADTPMPSDNRDPYMAVPSQTQQDANGVIRESYQKGRDQLVPVTLL
AIAVIMAFAMGAIFSGILVYCVCDHRRRDIELSGRKDKDHDRRGSMNSVTKLTGLFETGA
KDSRPEAILTPLMHNGRLTNGKILIKADQHHLDLAGMPTPESTPMQPRRKPSRGSREWER
NQNLINACTKDLQTMGSPVIPTDLPLRASPGHIPSVVVLPLPQHQHQQPYQHEYVEQPHR
SDLSQMSLGDQGATLEYKSLKSPCHSLNLVESDGLPPRVPQREASLTIPPAVPQMGKRLE
VHSSVYGHEYKRGYPMSAQKGSALKKHNTNSSNSSHLSRHQSFNHVESPPPAPQRVDSMH
MNSQGMSHSRQPSMSSYGSLPRTGVKHLKPDVPPKPSLVSLSTKVNSNDSCT
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaggccttgttgctgtatttcacgctactgaagattgcaagggctggcttc
ccagaagactctgagccaatcagtatttcacatggcaactatacaaagcagtatccggct
ttctttggacacaaaccaggaagaaacaatacacaacggcacaaactggatatccagctc
atcataataatgaaccgaacgttgtatatcgccgccagggatcacatatacacgctggat
acagacaccgtcaactctgaggagatctttttcaacaagaaactgacatggaagtccaga
caggcagatgtggacacctgccgaatgaaggggaagcacaaggatgaatgtcacaatttc
atcaaggtcctcctgcagcaaaacgatgacaccttgtttgtgtgcggaacaaatgctttc
aacccctcctgtcgaacttacaagatggataccatggaacatctaggagaggagatcagt
gggatggcacggtgcccatacgatgccaaacactctaacatcgccctgtttgcggatgga
aagctctactccgcaacagtaacagatttcctagcgattgatgctgtcatttatcgtagc
cttggagatagcccaactttgcgcactgtcaaacatgactccaagtgtctcaaagagccg
tattttgtacaggcagttaactacggtgatttcatctacttcttctatcgagaaattgcc
atggagtacaacacaatgggaaaggtggtgttcccccgtgtggccagggtgtgtaagaac
gaccggggcggctcccagagagttctggagaaacagtggacgtccttcctcaagacccgt
ctcaactgctccatcccaggagactcccacttctacttcaacattctgcaggccgtcacc
gacgtcatccacatcaacggacgcgacgttgtcatggcaaccttctccacaccttacaac
agcattcctgggtcggccgtctgcgcctatgacatggctgaggtggccaatgcgttcatg
ggacgtttcaaagagcagaagtcccctgattccacctggacacctgttcctgaggataaa
gttccaaaaccaaggcccgggtgctgtgctggcacgccgtccttagagaagtacaaggtg
tccaacgagttccctgacgacaccctgaacttcatcaagcagcaccctctcatggatgaa
gctgtgccctctatcgccaacaggccctggtttctcaagaccatggtgcgataccggctc
acccggatctccgtggacaacgctgcgggaccctatcggaatcacactgtcgttttcctg
ggctcggagaaggggatcattctgaaattcctggccaagatgaacagcggtttgctgaat
gacagtctctttctggaggagctcaacgtgtataacccggagaagtgcagcatcgatggt
gtggacgacaaacgtatcgtcagcatgcagatcgacaaccagggccactctctgtttgtg
gccttcacctcctgtgtggtcaaggtgccgctctctcgctgtgagaggcatggcaaatgc
aagaaatcatgtattgcctccagggatccctactgcggctgggtgtctgaaggagcatgc
agacaggtggtgctcgacccaaaatcggccttcgagcaggacgtggagcatggcaacaca
gatggactgggagactgccaaaatacgtttgtggccctcaacgatgttcagtccagtcct
catggtcatgaaagggctcgccatgaccatcccaccctcccattccccaccacggcccat
ccccctgcaggaggaccactgggtcggggcggcatggtggagcaggcggacacccccatg
ccctcagataacagggacccctatatggcagtaccctctcagacccagcaggatgccaat
ggagttatccgtgagagttaccagaaggggcgtgaccagctggtccctgtcacactgctg
gccatcgctgtcatcatggccttcgccatgggtgccatcttctctggtatcctcgtctac
tgtgtgtgtgaccaccggcgacgagacattgagctgtctgggcgtaaggacaaagaccac
gacaggaggggctccatgaacagcgtgaccaagttgacaggcctgtttgagaccggggcc
aaggacagtcgccctgaggccatcctcaccccgctcatgcacaacggccgcctcaccaat
ggtaagattctgatcaaagccgaccagcaccacctggacctggctggcatgcccacccca
gagtccacccccatgcagccccgacgcaagcccagccggggaagccgtgagtgggagagg
aaccagaatctgatcaatgcctgcaccaaggacctgcaaaccatgggctccccagtcatc
cccactgacctacccctgagggcctctccaggccacatccccagtgtggtagtgcttccc
ctgccacagcaccagcatcagcagccctaccagcatgagtatgtagagcagccccaccgc
agcgacctcagccagatgagcctgggtgaccagggtgccacactggagtacaagtcccta
aagagcccctgccacagcctcaacctggtggagagcgacggactgccaccccgagtgccc
caaagggaggcctccctcaccatcccccctgccgtgccccagatgggcaagcggctcgag
gtgcactcctccgtctatggccatgagtacaagcggggctacccgatgagtgcccagaaa
ggctctgccctcaaaaagcacaacaccaactcgtccaactcctctcacctgtccagacac
caaagttttaaccacgtggagtcgccgccccccgccccacagagggtggactccatgcac
atgaattcccaggggatgtcccactccagacagcccagcatgagctcttatggttcattg
ccccggaccggggtcaaacacctcaagcctgacgtaccgcccaaaccctctttagtgtcc
ctctcaacgaaagtcaattccaatgactcctgcacataa
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