Oncorhynchus kisutch (coho salmon): 109895606
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Entry
109895606 CDS
T09179
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109895606
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109895606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
ERCC3_RAD25_C
HHH_3
T2SSK
Motif
Other DBs
NCBI-GeneID:
109895606
NCBI-ProteinID:
XP_020345034
Ensembl:
ENSOKIG00005034252
UniProt:
A0A8C7MUA8
LinkDB
All DBs
Position
LG8:complement(46492408..46517036)
Genome browser
AA seq
1020 aa
AA seq
DB search
MSLFNLERFRFDKNKPTSNQDKYSGSVCPESGKENKPARVTTPVSNLGIPGRGVVFEDVI
SVTDDLASDSRSDKLTQRVMEPVKESLKREVREMTETSDKEDKMDKDLEERLAKLQEIFP
RRDRKELLEVIKSTSTLDGAVASCLMFGDKDSTRKRKQDGSSSSQDSDVVPQPSKKRRSS
LPEDSEEGAEPSWERREAMVRKLQRKFPDQDKEELRSVLQEHEWNVDDALEVLRMFSDPD
EDSSAPEVSSSPEVKQKELNAKSNAKPSKAKSDAKPSRDRWESKDSKEEARRSNASALKW
LFKKPAHESRPNSSSSSSISTSQKLSNGTSVAKKEASERKRKVRASYERASSSEDEDTEG
ASSEFEGEDDELDFVAEDAGTSTLKGQILSFFQEASLDELSLIAGCSLKKAQKIVELRPF
AVWQDLEEVFHKENGLSAELLLGCRVVLRERAVVQGLMSKCQTISGKMVKGVTQVIDKDM
GSMTQPSVLNRKLQLKPYQLIGLKWLLLLHQHKLNGILADEMGLGKTIQAIAFLGRLHQD
GIDGPHLITVPSSTLDNWVRELKLWCPSLKVLVYYGSVEDRRYLRHDILSNQVDFNVIVS
TYNLAIGNDSDRSLFRKLRLKYAVFDEGHMLKNMNSLRYRHLMAINAEHRLLLTGTPLQN
NLLELMSLLNFIMPSMFSSSTTQIAKMFSMKSHEEQSRFERDRIAQAKLIMKPFILRRVK
SEVLKQLPAKEERLEFCTMSEKQQLLYQNMVGKLKKSAIGEKKVMCNVMMQLRKMANHPL
LHRQYYTTERLEAMSQLMLKEPTHLDADPVLIQEDMAVMSDFELHRLCQQYSSLHKYQLE
KDLLLDSGKFHLLQTLLATLKTKGDRVVLFSQFTMMLDIVEILLKHLGHRYVRLDGSTPI
ADRIVLIDDYNMDPEIFVFLLSTRAGGLGINLTSANVVIMHDIDCNPYNDKQAEDRCHRL
GQTRTVQVIKLIHKDTIEGGMLQLGQKKLKLEQDMTAAEEGDEGTMSEDMAVLLKASLGL
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgagtctatttaatttagagcggtttcgttttgacaagaataaaccgacatcaaatcag
gacaaatacagcggttccgtatgtccagagtcgggaaaggagaataaaccagcccgagta
acaacacctgtatccaaccttggaatacctgggcgaggagtagtatttgaagatgtcatc
agtgtgactgacgatttggcaagtgactcgagaagtgataaattaacacaaagggtgatg
gaacctgtaaaggaatcactgaagcgagaggtaagagagatgactgagacatctgataag
gaagacaaaatggacaaggatctggaagagagactggccaaactgcaggaaatcttccct
cgaagagaccggaaggagctgctggaggtgattaaaagcacaagcactttggatggtgcc
gtagcctcatgcctgatgtttggtgacaaagactcaacgcgaaagaggaaacaggatggc
tccagcagttcccaagacagcgacgtggttccgcagcccagtaagaagaggagatcgtct
ctgcctgaagactctgaggagggagcagagcccagctgggagagacgggaggccatggtc
aggaaactgcagaggaagttccctgaccaggataaggaggaactgaggtccgtgctccag
gaacatgagtggaacgtggatgacgccctggaggtgctgcgcatgttctcggacccagat
gaagactctagtgcacctgaagtatccagctcccctgaagtcaagcaaaaggaactgaat
gccaagagtaatgccaaaccaagcaaagcaaagagtgatgccaagccgagcagagaccgt
tgggagtctaaggatagcaaggaggaggccaggcgaagcaatgcttccgctctgaaatgg
ctgttcaagaaacctgcacatgaatctaggcctaactcctcgtcctcctcttcgatttct
accagccagaagctctccaacgggaccagcgtggctaagaaggaggcgtctgagaggaag
aggaaggttcgcgcctcctacgaaagggccagcagctcggaggatgaggacacggaaggg
gccagcagtgagtttgagggcgaggacgacgagctagattttgtggcagaggacgcgggc
acatccacgctcaaaggccagatcctgagcttcttccaggaggcctcgctggatgagctg
tccctcatcgccggctgctcgttgaagaaggcccagaagattgtggagctacggcccttt
gctgtttggcaggacctggaggaggtgttccacaaagagaacggcctgtctgcagagctg
ctgctgggctgcagggtagtgctgagggagagagccgtggtccagggcctcatgtccaag
tgccagaccatctcgggcaagatggtaaagggagtcacccaggtcatagacaaggacatg
ggctccatgacccagccctcagtactcaacagaaagttgcagttgaaaccctaccagctg
attgggctgaagtggcttctcctgctgcaccaacacaagctgaatggaatcctggctgac
gagatgggtttgggaaagaccatccaagccatagccttcctgggcagactgcaccaggac
ggcatcgacggcccccacctcatcactgtgccctcctccacccttgataactgggttcgt
gagctaaagctgtggtgccctagtctcaaggtgttagtctactacggctctgtggaggac
cggcggtacctgcgacatgacatcctcagcaatcaggtggacttcaacgtcatcgtgtcc
acctacaatctggccatcggcaacgacagcgaccgcagtctcttccgcaagctcagactg
aagtatgccgtgttcgacgagggccacatgctgaaaaacatgaactccctccgttaccgc
cacctcatggccatcaacgcggagcaccggctgctcctgaccggcacccctctgcagaac
aacctgctggagctgatgtcgctgctcaacttcatcatgccctccatgttctccagcagc
accacgcagatagccaagatgttctccatgaaatcccacgaggaacagagtcgttttgag
agggaccgcatcgcccaggctaaactcatcatgaaacctttcatcctcagacgagttaag
agcgaggttcttaagcagctgccagcgaaggaggagaggctggaattctgcaccatgagc
gagaagcagcagctgctttaccagaacatggtgggcaagctcaagaagtctgccatcgga
gagaagaaagtgatgtgcaacgtgatgatgcagttgaggaagatggccaaccaccctctg
ctccaccggcagtactacaccacagagcgactcgaggccatgagtcaactcatgctcaag
gagccgacccatttggacgcggacccggtgctgatccaggaggacatggcggtgatgtcg
gactttgagcttcaccggctatgccagcagtactcgtcgctgcacaaataccagctggag
aaagacctactgctggactccgggaagttccacctgctccagacgctactggccacactt
aagaccaagggagaccgggtggtactcttcagtcagttcaccatgatgctggacattgtg
gagattctgcttaaacacctgggccaccgctatgtccgactggatggctccacacccata
gcagacaggatcgtgctgattgacgactacaacatggacccggagatctttgtgttcctg
ctgtcgacgcgggcgggcggcctgggcatcaacctgacctctgccaacgtggtcatcatg
cacgacatcgattgtaacccctacaacgacaagcaggcagaggaccgctgccacagattg
ggccagactaggactgtccaggtgatcaaactgatccataaggacaccatagagggtggc
atgctgcagctgggccagaagaagctcaaactggagcaggacatgaccgctgccgaggag
ggtgatgagggcaccatgtctgaggacatggccgtcctcctcaaggcatcgctgggcctg
tga
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