Oncorhynchus kisutch (coho salmon): 109895617
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Entry
109895617 CDS
T09179
Name
(RefSeq) rho-related BTB domain-containing protein 1 isoform X1
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109895617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109895617
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
oki04031
]
109895617
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
109895617
GTP-binding proteins [BR:
oki04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
109895617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
Ras
Roc
FAM186A-B_N
Motif
Other DBs
NCBI-GeneID:
109895617
NCBI-ProteinID:
XP_020345052
Ensembl:
ENSOKIG00005033320
UniProt:
A0A8C7MTF6
LinkDB
All DBs
Position
LG8:45788617..45887817
Genome browser
AA seq
728 aa
AA seq
DB search
MWVNTGTVGRALSMDIDTDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLA
THVPTVWAIDQYRVCQEVLERSRDVVDEVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCF
SLANPNSLRHVRTMWYPEIKHFCPRTPIILVGCQLDLRYADLEAVNRARRPLAKPIKPTD
ILPPERGHEVAKELGIPYFETSIVAQFGVKDVFDNAIRSALISRRHLQFWKSHLKRVQRP
LLQAPFLPPRPPRPVVGIPDPPPIDGEAPDSLFCQSLCADVLFLLQGGATRVFAHKVYLA
TSCSKFYDLFTLDLLATESDWEGEERAESGEEDEQSRRGAKEQAGRTKSLDIDKEGEGGA
RGLKRPPMLQQGSLRTSKSDNALPARSQCPLGPLGAGRGLSGWGRGFLSVYLEHIADPET
GRLRLMTVVSMDGLIQEEPFQAVLQYLYTGSLDESRGGLMQVATIAELLEVFDLRMMVAN
VLNRESFMNQEITKAFHVRRANRIKECLSKGTFADVVFHLDDGYLPAHKPLLISSCDWMA
AMFRGSFMESYIEEVSIPDTSSSCMRAVLEFMYCGLLSPCHDLEPIELIVLSNRLCLPRL
VALTEQHAVNELLQWAMKGVDIDGQVLAYLELAQFHNAKQLSAWCLHHICTNYNSVCRKF
PKDMKVMSPENQRHFEKQRWPPVWFLKEEDRYLRSQKEREREEEILRKLRTKRGWCFSRH
PSSSPHVS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcaataccggaacagtcggaagggccctctccatggatatagacacagactat
gagcggcccaacgtggaaaccattaaatgtgttgtggtaggggacaacgcagtgggcaag
actaggctcatctgtgcccgcgcctgcaatgccaccctcacacagtaccagctgctcgcc
acccacgtgccaactgtctgggccattgaccagtaccgcgtgtgccaggaggtgttggag
agatcacgggatgttgtggatgaggtcagtgtgtccctgagactatgggacaccttcggt
gaccatcacaaagacagacgcttcgcgtacggcaggtctgacgtggtggtgctgtgtttc
tccctggccaaccccaactccctgcgccacgtccgcaccatgtggtaccctgagattaag
cacttctgcccccgcacccctatcatcctggtgggctgccagctggacctgcgctatgcc
gacctggaggctgtcaaccgcgcccgcagacccctagccaaacccatcaagcctacagac
atcctacctccagagagaggccacgaggtggcaaaggagctgggcattccctactttgag
accagcatcgtggcccagtttggggtaaaggatgtgttcgacaatgctatccgttctgcc
cttatctcccgccgccacctccagttctggaagtcccacctgaagagagtccagcggccc
ctcctccaggccccgttcctgcccccccgtccccctcgccctgtggttggcatccccgac
ccccctcccatcgatggagaggcccctgattccctcttctgccagtcgctgtgcgccgac
gtcctcttcctcctccagggcggtgccacgcgtgtcttcgcacacaaagtctacctggcc
acatcctgctccaagttctatgacctcttcaccctggacctgctggctactgagtcagat
tgggagggagaggagcgagctgagagcggggaggaggacgagcagagcaggagaggggcc
aaagagcaggcggggcgcacgaagagcttggacatcgataaggagggggaggggggcgcc
aggggactcaaacggccacccatgctccagcagggctccctgaggacttccaaaagtgat
aacgccctccccgccaggagccagtgccctctggggcccctgggagccggccgtggcctc
tcgggatgggggaggggcttcctgagtgtgtacctggagcacatagctgaccctgagacg
gggcgacttcgcctcatgactgtggtctccatggacggcctcatacaggaagaacccttc
caggcggtgctgcagtacctgtacacaggcagtctggacgagagccgagggggcctgatg
caggtggccaccatcgccgagctgctggaggtgtttgacctgaggatgatggtggccaac
gtgctgaaccgtgaaagcttcatgaaccaggagatcaccaaggccttccatgtccgccga
gccaaccgcatcaaagagtgcctcagcaagggtaccttcgccgatgtggtgttccacctg
gacgatggatacctgccggcccacaagcccctgctcatctccagctgtgactggatggcg
gccatgttccggggatccttcatggagagctacatcgaggaggtgtccatccctgacacc
agtagctcctgtatgcgtgcagtgttggagttcatgtactgtgggctgctttcgccctgt
catgacctggagcctattgagcttatcgtcctatccaaccggctgtgtctgccacgcctt
gttgccctcacagagcagcatgctgtgaatgagctgctccagtgggcgatgaagggagtg
gacatcgacggacaggtgctggcttacctggagttggctcagttccacaatgccaagcag
ctgtctgcctggtgtctccatcacatctgcaccaactacaacagcgtctgtcgcaagttc
cctaaagacatgaaggtcatgtctccagagaaccagaggcactttgagaagcagcggtgg
cctccggtgtggttcctgaaggaggaggaccgctacctgcgctctcagaaggagcgcgag
cgcgaggaggagatcctacgcaagctgcgcaccaagagaggctggtgcttctcgagacac
ccgtcctcctcgccccatgtctcctga
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