KEGG   Oncorhynchus kisutch (coho salmon): 109895630
Entry
109895630         CDS       T09179                                 
Name
(RefSeq) cyclin-H isoform X1
  KO
K06634  cyclin H
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03022  Basal transcription factors
oki03420  Nucleotide excision repair
oki04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109895630
  09124 Replication and repair
   03420 Nucleotide excision repair
    109895630
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    109895630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oki03021]
    109895630
   03400 DNA repair and recombination proteins [BR:oki03400]
    109895630
Transcription machinery [BR:oki03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     109895630
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     109895630
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N Cyclin_C NADPH_Ox CycT2-like_C
Other DBs
NCBI-GeneID: 109895630
NCBI-ProteinID: XP_020345077
Ensembl: ENSOKIG00005031684
LinkDB
Position
LG8:43023662..43030574
AA seq 322 aa
MFHISSQKKYWTFDNEESLEQLRYEANQKYRNKMLASGKPGVSDAVFLEAHEENVLFRHY
EKRLLDFCNAFKPVMPKSVVGTAIMYFRRFYLNNSLMEYHPRTIMLICAYLSCKVDEFNV
SSTQFVGNLVQESAAGQERALEQILEYELLLIQQLNFHLVVHTPYRPMEGLLIDIKTRYP
LLENPESLRKSVDDFLTRVTLTDSGLLFPPSQIAMTAILNSASRAGLSMESYLTECMGLK
EDKETLLKMYDAMRRIKSLMKKYELPKPDEVNAYKVKLERVHADFGTNSNMKRKRGYEDD
DHVAKEPRMTEEEWTDEDLDDL
NT seq 969 nt   +upstreamnt  +downstreamnt
atgtttcacattagctcacagaaaaagtactggacattcgacaatgaagaaagtctggaa
caactgagatatgaagccaaccagaaatatcgcaacaaaatgcttgccagtgggaagcct
ggggttagtgacgccgtgttcctggaggctcacgaggagaatgtccttttcagacactat
gagaagagactccttgacttctgtaatgctttcaagcctgtgatgcccaagtctgttgtg
ggtacagctatcatgtatttccggagattttacctgaacaactcactgatggaataccac
cccagaacaatcatgctgatctgtgcctacctgtcctgtaaggtggatgagtttaatgtg
tccagcacccagtttgtggggaatcttgtgcaggagagtgcggccgggcaggagagggct
cttgaacagattttggagtatgagctccttctcattcagcagctcaacttccacctggtg
gtgcacaccccctacagacctatggagggcctgctcatagacatcaagacaaggtaccct
cttctggagaacccagagtctctgaggaagagtgttgatgacttcctgacgcgggtcacc
ctgacagacagtgggctgctgtttcccccatctcagatagccatgacagccatcctgaac
agtgcgtcgcgggccggcctcagcatggagagctatctgactgaatgtatgggactgaag
gaggacaaagaaactctgttaaagatgtacgacgcgatgagacggataaaaagtctcatg
aaaaagtatgaacttccaaaaccagacgaggtgaacgcttacaaagtgaaactggagagg
gtccatgctgactttggcacaaactccaacatgaaaagaaaacgaggatatgaggatgac
gatcatgtagcgaaagagccccgcatgacagaagaggagtggacagatgaagatttggat
gacttatga

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