Oncorhynchus kisutch (coho salmon): 109895670
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Entry
109895670 CDS
T09179
Name
(RefSeq) small G protein signaling modulator 1-like isoform X1
KO
K21847
small G protein signaling modulator 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109895670
Membrane trafficking [BR:
oki04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
109895670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_RBD
RUN
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
109895670
NCBI-ProteinID:
XP_020345145
Ensembl:
ENSOKIG00005033548
LinkDB
All DBs
Position
LG8:complement(40449623..40532800)
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AA seq
1467 aa
AA seq
DB search
MPTTTTAAAMAEAEMRQRLLCTVKKEVKQIMEEAVTRKFVHEDSSHIVSFCAAVEACVLH
GLKRRAAGFLRSNKIAALFMKVGKSFTPAEELCRKAQELEQIIESKRNQSMPNQDSVRRL
PRLSSLSPQVVRNLWIRTALFEKVLDKIVLYLVENSSKFYEKEAILMDPVDGPILASLLV
GPCALEYTKMKTADHFWTDPSADELVQRHRIHSGHCRQESPTKRPALCIQKRHSSSSIDE
RPSPSPSARDYVESLHQNNRATLLFGKNNVLVQPRDDMEAIPGYLSLHQTADIMTLKWTP
NQLMNGSVGDLDYEHSVYWDYAMTIRLEEIVYLHCHQQVDSGGTVVLVSQDGIQRPPLRF
PRGGHLLQFLSCLENGLLPHGQLDPPLWSQRGKGKVFPKLRNKCSQGSSDSVSDKEEDEA
TDYVFRILFPNSQSEFVTITHPPRVSPGAPLLSRSFSLHLRGKPPTKGILVVPKRSCSYP
RDHSSTTTGNSLAPELMDQGANIWQPIPRKSSYSSCTQGSFSDGGPPNGCNHERAPLKLL
CDQMKYQIISRAFYGWLAYCRQLSTVRTHLSALVNHTIVAPDVPCDAFTGLTAEVWQRFL
QDCTAYNEQELLRLVYFGGVDPSLRKEVWPFLLGHYQFGMSESDRKEVDEQVRACYEQTM
SEWLGCEAIVRQREKEQHAAALAKCLSVSASVDNPNPVQRMLHHDSSISNESSRSCSSDR
QSLARLQSDSSSSTQVFESVEEVDQIETEPKCKEAKQVPKIPNGGALPNGTSSPDSGHPS
SRNFSVTSGLSDRSLSTEDSTAPDTTPKNITSTPPQLAPAPQSPVKAHEEELEADSPRAQ
PPALQEEKDLQAKDPPEKEEKESATEVTQEIEGNETEGPDIEIDKNTVTVEPVETEMPEV
EIDKTEVLEIEIDKNTETREDKAADLGALESQKMEEENTSVTGPPEKEEVRINEKGDIEL
PKAEVDAVEETVKSKTDEFKTTEAKEPETEVVKMLDGEPTMRADTEELQSLEAETLKTQE
SRETEDEGSEPESVDPEENETSQTNHREPKEEKALTSTMTAEAMEDKTSEFEVERTSEAG
ETKSAETSEVKEAEGKTMEKKETEKEVEANETLKFEEVTETKGVKTMSREEVAEENVEDI
TKSKEVGKRAIEMATVSIAPLWDRIGPCDSSGVGVALSEGSVPHLELQLEEEEQCKTSPE
GTESNLSEEPEMESIFPQFDSLTVGRELTNEDISPVSSIGTTYSQELLDMYTMNLHRIEK
DVQRCDRNYWYFTPANLEKLRNIMCSYIWQHLEIGYVQGMCDLLAPLLVILDDEAMAFSC
FTELMKRMNQNFPHGGGMDTQFANMRSLIQILDSELFELMHQNGDYTHFYFCYRWFLLDL
KRELVYDDVFAVWETIWAAKYASSGHFVLFIALALVEVYRDIILENNMDFTDIIKFFNEM
AEHHNSKQILTLARELVCKVQTLIENK
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaacaacaacagcagcagcaatggcagaagcagagatgcgtcagaggctactg
tgcaccgtcaagaaggaggtgaagcagatcatggaggaggctgtcacaaggaagtttgta
catgaagacagcagccacattgtctcgttttgtgctgcggtggaggcttgcgttctacat
gggcttaagcggcgagcggcgggattcctgcgtagcaataaaatagcagcgctcttcatg
aaggtggggaagagcttcaccccggcagaggagctgtgcaggaaggctcaggagctggaa
cagatcatcgagagcaagcggaaccaaagcatgcccaaccaggacagcgtacggagactg
cccaggctgtcgagcctcagcccgcaggtggtcagaaacctgtggatccgcacggccctc
ttcgagaaggtgctggacaagatcgtgctctacctcgtggagaacagcagtaaattctac
gaaaaagaggccattctgatggatccggtggacggacccattctggcctctttgttagtg
gggccctgtgccttggagtacacgaagatgaaaacagcggaccacttctggacagacccc
tcagcagacgagctggtccagagacaccgcatccacagtggtcactgcagacaggaatcc
cccaccaagaggcctgccctttgtatccagaagagacattcaagtagcagcattgatgag
cggccttccccctcgccctcagcccgggactatgtggagtcactacaccaaaacaacaga
gccaccctgctgtttggaaagaacaacgtgctggtgcagccgagggatgacatggaggct
atcccaggatacctttctctccaccagaccgccgacatcatgacgctgaagtggacgccc
aatcagctgatgaacggctctgtgggagacctggactatgagcacagtgtgtactgggat
tacgctatgaccatccgcctggaggaaattgtttatttgcactgtcatcagcaggtggac
agcgggggcacggtggtgctggtgagccaggacggcatccagagacccccgctgcgcttc
cctagaggggggcatctgctccagttcctctcctgcctggagaatggcctcttgccccat
ggccagctggatcctccgctctggtcccagagaggaaaggggaaggtgttccctaaactg
agaaacaagtgttcacagggctcctcggactcagtgtccgataaggaggaggatgaggcc
acagactatgtcttccgcatcctgttccccaacagccaatcagagtttgtgactataaca
caccctccccgtgtttccccgggggctcctctcctgtcccgctccttctccctccatctg
agaggaaagcccccgaccaaagggatcttggtggttccaaagcgctcctgcagctatccc
agagatcactcctcaaccaccacagggaacagcttggctccagagctgatggaccagggg
gccaacatctggcagcccatccccaggaagtcctcctactcatcctgtacccagggcagc
ttctcagatggaggaccccccaacggttgcaaccatgaaagagcccctttgaagctgctg
tgtgaccaaatgaagtatcagataatctcccgggcgttctatggctggctagcttattgt
cgtcaactgtccactgtacgtacacacctctcggccctggtcaaccacactatcgtggca
cccgatgtgccctgcgatgccttcacgggcctcaccgctgaggtgtggcagaggttcctt
caggactgcactgcctataacgagcaggagctgctgcgcctggtgtacttcggcggtgtt
gatccttcgctgcgtaaggaggtgtggcccttcctcctgggccactaccagtttggcatg
tctgagtctgacaggaaagaggtggatgagcaggtgcgggcgtgctacgagcagaccatg
agcgagtggctgggctgcgaggccatcgtgcggcagcgggagaaggagcagcatgcagcg
gcgctggctaagtgcttgtctgtctcggccagcgtggataatcccaaccctgtccagagg
atgctgcaccatgactccagcatcagcaatgagtcctcccggagctgcagctcagacaga
cagagcctggctcgcctgcagagtgactccagcagcagcacccaggtgtttgagtctgtg
gaggaggtggatcagattgagaccgagcccaagtgcaaagaggccaagcaggtgcccaag
atccccaatggaggagccctgcccaacgggaccagctccccagactcgggtcacccctcc
tctcgcaacttctcagtcacctcgggcctgtcagaccgctctctgagcacagaggacagc
actgcgcctgacaccacccctaaaaacatcaccagcactcctccacagttggccccagcc
ccacagagcccagtcaaagcccatgaggaagagttggaggcagatagcccgagagcccaa
cccccagccctgcaggaggagaaggacctccaggccaaggacccaccagagaaggaggaa
aaagagagtgcgaccgaagtgacccaggagattgagggcaacgagacagaagggccagat
atagaaatagacaaaaatacagtgacagtagagccagtagaaacagaaatgccagaagta
gaaattgacaagacagaggtgctagagattgaaattgacaaaaacacagagacaagggag
gacaaggcagcagacctaggtgcgttagagagccagaaaatggaggaagaaaatacttcc
gtgactggacctcccgagaaagaagaggtaaggatcaatgaaaagggggacattgagtta
ccgaaagcagaagtggatgctgtagaagaaacggtgaagtccaaaacagatgagttcaaa
acaacggaggctaaagagcctgagacagaagtggtgaaaatgttggatggagagccaacc
atgcgagcagacacagaggagttgcagtcactggaagcagagacattgaaaactcaagag
tcaagagaaacagaggacgaaggatcagaaccagagtctgtagatccagaagagaatgaa
acatcccaaacaaaccatagagagccaaaagaggagaaggcattgacatcaacgatgact
gcagaagcaatggaggacaagacatcagaattcgaggttgagcgaacttcagaggctgga
gaaacaaagagtgctgaaacatcagaagtaaaggaagctgaaggaaagactatggaaaaa
aaagaaactgagaaagaagtagaagccaatgagactttaaaatttgaagaggtaaccgaa
acaaagggggttaagacaatgtcacgcgaagaagttgcagaggaaaatgtggaggacatt
acaaaatctaaggaagtgggaaaaagagccattgagatggccaccgtctccattgcccca
ctgtgggaccggattggtccgtgcgacagttccggggtcggggtcgctctctctgagggc
tcagtcccccatctggagctccaactggaggaggaggagcagtgcaaaaccagcccagag
ggcacagagtccaacttgtccgaggagcctgagatggagagcatcttcccacaatttgac
tccctgaccgtgggcagagagctgacaaacgaggacatttctccagtgtcatccatcgga
accacctattctcaagagcttttggacatgtacacgatgaacctgcaccgcattgagaag
gatgtccagaggtgtgacagaaactactggtactttacccctgccaacctggagaaactg
cgcaacatcatgtgcagctatatctggcagcacctggagattggctatgtgcagggcatg
tgtgacctgctggctcccctccttgtcattctggatgatgaggccatggccttcagctgt
ttcactgagctcatgaagcggatgaatcagaacttcccccatggcggtggcatggacact
caatttgccaacatgcgctctctcatccagatcctggattctgagctctttgagctcatg
caccaaaatggcgactacacccacttctacttctgctaccgatggttccttctagactta
aagcgtgagctggtgtatgacgatgtgtttgcggtgtgggaaaccatctgggcagcaaag
tacgcctcctctggccactttgtcctcttcatcgctctggcactggtggaggtctaccgg
gacatcattctggagaacaacatggacttcaccgacatcattaagtttttcaacgaaatg
gctgagcatcacaacagcaagcagatcctgacactggcccgggaactggtgtgcaaggtg
cagactctcattgagaacaagtga
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integrated database retrieval system
