Oncorhynchus kisutch (coho salmon): 109895714
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Entry
109895714 CDS
T09179
Name
(RefSeq) low-density lipoprotein receptor-related protein 2 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109895714
Membrane trafficking [BR:
oki04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109895714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
hEGF
EGF
EGF_LRP2
EGF_3
DUF4520
Motif
Other DBs
NCBI-GeneID:
109895714
NCBI-ProteinID:
XP_020345226
Ensembl:
ENSOKIG00005013343
UniProt:
A0A8C7FQ32
LinkDB
All DBs
Position
LG8:38072176..38080856
Genome browser
AA seq
1502 aa
AA seq
DB search
MAFYLLLSISILEISVLSVAVRTPLKCNLGTKPCKDGSECILYQHVCDGEVDCRDGSDEE
DCTVTCTKGQFLCAHGKKCIDQRQVCDGVAQCQDRSDEVDCLEHMEGCAHHCDKTRCLPD
TFLCDGEKDCLDGTDEADCDSDSDGHKNHHDEVSENDSSNYKGITTMSAPAPLKCPFGTK
PCQDKTACVLYSHVCDGDADCKDGSDEETCSLECDNGQFQCAHGKKCIDQRQVCDGVAQC
QDRSDEIHCLKPMEGCAHHCDNKTRCLPDTFLCDGERDCLDGTDEANCDSDSTDDHKNHR
YFVAEDYDGNNEGNATSMSAPAPLKCTFGTKPCKNNIECVLYSHVCDGEADCKDGSDEEL
CSLECGSGQFQCAHGKKCIDQRQVCDGVAQCQDRSDEIHCLKPMEGCAHHCDNKTRCLPD
TFLCDGERDCLDGTDEANCADESCSSGEFRCTSGQCVSISMRCDGHPDCWDHSDEESCHK
PPQCTTNRRCPQSQECLLEEWVCDGEQDCKDGSDEENCEMVQLKCGEFQWACTSKSQCVP
KAWRCDGTKDCADESDEAGCGQVATCPSHQFQCASTSECLDMALVCNSVRNCADGSDEGG
DCKTTCPDKAICVQNCYSTPQGTRCGCKAGYQLNEDAVSCGDIDECVGGRQGVCSHSCVN
TQGSFHCHCNPGYLLESDGRHCKIMGEPYLLASVQTDLFLVGLRSSSLYVLVSSAKKAIL
SVDYDWRDQRVFWVSLDSESIKWSSLDQKKQGTLFKGIKSDCIAVDWIGRNMYWIDGIGG
GRIIAIGLNSTITSALDLTVILDKEFGQLLYLALLPQKGLLFWSEISNEAKIERAGMDGS
ERRVVVSHSLSWPGSLAVDPIGERLYWTDKKLGCIGSATLDGGDVKILQLLETTNPFSVT
VFNDLLYWSDTKRGTIQGANKITGKNCKVLLKRPAQAFGLKVIHPLLQTSTDSPCEKLHC
SHLCVLAPGPKGVCKCPSGLLLAEDGLNCSNLVNSAFLLVLSPTVVTQIYLQTMLSAVGL
KTWPEHLSLPLANVNEAAILDYTLRDKMLYLADSGHSSVGLFKLKETSLVPRGQFLQLKG
DTVTALALDWITLNVYWSSTKQSRLQVTSSNGEHTAVLIDDIGSLESIALHPLSGRLCFA
KQGESAHVECAHMDGGKRAQVWKDAVQPTSLTFSNDGGEIYWADIGAGVIGSVRVDGSGY
IAFTTGDGLIAFALSNSMLLWVTDRDTTQVWYRDDQLIKTLWFEVNTEVVSLKAYSKSSQ
MGFNFCSDGNGDCSHFCLAVPGGRTCRCAHGHRPVNATHCALDQHCPAGSRPCLDGHTCL
PLEKFCDGHPECLDTSDENCVHLKGQSEVQSKAPTLPPSPSIPTSADLGSTTSLDNSGLV
RNLDVKQQCSEKRCNGNGECVETNGGTSCACGQGYSGDSCQDQLANTMQGPLIYGAVGLC
AAIVVISVLVAVVRRKTANARRASPVVKQTSMTDLAKHGDSPSTQHSPDDTNFSEEVASS
VA
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggctttctatctgcttctgagtatatcaattttggaaatctcagttttgagtgtagct
gtgcggactccattgaaatgcaacctgggcaccaaaccttgcaaggatggatctgagtgt
attctttaccagcatgtgtgtgacggtgaagtcgactgtagggatggctctgatgaggag
gactgcactgtcacatgcactaaaggccagtttctgtgtgcccatgggaagaagtgcatt
gaccagaggcaggtgtgtgacggggtggcccagtgtcaggaccgttctgatgaggtggac
tgcctagagcacatggagggctgtgcccaccactgtgacaagacccgctgcctccctgac
accttcctttgtgatggagagaaggactgcctggatggcactgatgaggcagactgtgat
tcagactccgatggtcacaaaaatcatcatgatgaagtttctgaaaatgactcaagcaac
tacaaagggattaccaccatgtctgcaccagcacccctcaaatgtccttttggcacgaaa
ccatgtcaggacaagactgcgtgtgttctttacagccatgtgtgcgatggagatgcagat
tgtaaagatggctcagatgaggagacatgttcattagaatgtgacaatggccagtttcag
tgtgcccatggtaagaagtgtattgaccagaggcaggtgtgtgacggggtggcccagtgt
caggaccgttctgatgagatacactgcctgaagcccatggagggctgtgctcaccactgt
gacaacaagacccgttgcctccctgacaccttcctctgtgatggagagagggactgcctg
gacggcaccgacgaggccaactgtgattcagactccactgatgatcataaaaatcatcgc
tattttgttgctgaagattatgacggcaacaacgaagggaatgccacctcgatgtctgca
ccagcacccctcaagtgtacttttggcactaaaccatgcaagaacaatattgagtgtgtg
ctttacagccatgtgtgtgatggagaggcagattgtaaagatggctccgatgaggaattg
tgttcattagaatgtggaagtggccagtttcagtgtgcccatgggaagaagtgcattgac
cagaggcaggtgtgtgacggggtggcccagtgtcaggaccgttctgatgagatacactgc
ctgaagcccatggaaggctgtgctcaccactgtgacaacaagacccgctgcctccctgac
accttcctctgtgatggagagagggactgcctggacggcaccgacgaggccaactgtgct
gatgagagctgcagcagtggggagttccgttgcaccagtggtcagtgtgtatctataagc
atgcgctgcgacgggcatcctgactgttgggaccactctgacgaggagagctgccacaag
cccccccagtgcaccaccaaccgccgctgcccacaaagccaggagtgtctgctggaggag
tgggtctgtgatggggagcaggactgtaaagatggctctgatgaagagaattgcgagatg
gtccaattgaagtgtggggagttccagtgggcctgtacatcaaagagccaatgtgttccc
aaagcatggagatgtgatggaacaaaggactgtgctgacgaaagtgacgaggcaggatgt
ggccaggtggcaacatgcccctctcaccagttccagtgtgctagtacgtcagagtgtttg
gacatggccctggtgtgtaactcagtcagaaattgtgctgatggttctgatgagggtggc
gactgcaaaaccacgtgtccagacaaagccatatgtgtccaaaactgctacagcacacca
cagggaacaaggtgtgggtgtaaggctggttaccagctcaacgaggatgcagtgtcctgt
ggtgatattgatgagtgtgtaggtggtagacaaggtgtttgcagccactcatgcgtaaac
actcagggctccttccactgtcactgcaaccctggttacctgctggaatctgatggccgc
cactgcaagatcatgggtgagccttatcttctggcctctgtgcagacagacctgttcctt
gttgggctgagaagcagtagtctgtatgtcctggtgtcctctgctaagaaagccatcctg
tctgtggactatgactggagggatcagagggtgttctgggtcagcctggattcagagagc
ataaagtggtcctctctagaccaaaaaaaacaaggaactcttttcaaaggcatcaaatct
gactgcattgctgttgactggatagggagaaacatgtactggattgatggcattggaggt
ggtcggattattgctattggattaaactcaaccattacaagcgctctggatctcactgtc
attcttgacaaggaatttggacaacttctctatctggcactcctgccacagaaggggctc
ctgttctggtcggagattagtaacgaggcaaagattgagcgggccggaatggatgggtct
gagaggagagtggtggtcagtcacagcctcagctggccaggcagtctggctgtggaccca
ataggagagcggctctactggacggacaagaagcttgggtgcattggctcagccaccctg
gatggcggggacgtcaagattctgcagttgctggagaccaccaacccattctcggtcaca
gttttcaatgacctgctctactggtcagacaccaagaggggaactattcaaggggctaat
aaaatcactggaaagaactgcaaagttctactcaaacgacctgcacaagcttttggactc
aaagtcattcatccactgctgcaaacaagcactgatagtccctgtgagaaacttcattgc
tctcacctgtgtgtattggcccccggccccaaaggggtctgcaagtgtccctctggtctg
ctcctagcagaggatggcctcaactgctccaacctggtcaactctgccttcctcttggtg
ttgtctccaacagttgtcacacagatctacctgcagaccatgctcagtgctgtgggcctg
aagacctggcctgagcacctctctctacctctcgccaatgtcaatgaggcagccattttg
gattacaccctacgagacaagatgttgtacctggctgactccggccattcctctgtaggc
ctcttcaagctgaaagagaccagcttggtgcctcgcggccagttcctgcaacttaaaggg
gacactgtcacagccctggctctagactggataaccctcaacgtgtactggagtagcacc
aaacagtcacgcctgcaggtcacctcttccaatggggaacacactgctgtgttaattgat
gatattggaagtctggagtccatagctcttcacccacttagtggaagactctgttttgcc
aagcagggggaaagtgctcatgtggagtgtgctcacatggacggggggaagcgagcgcag
gtttggaaggatgctgtgcagcccacctccctgactttctccaatgatggtggggagatt
tactgggctgacatcggcgctggggtgatcggctctgtcagagttgatggttctggatac
attgcgtttacaactggggatggcctgattgcatttgctctcagcaacagcatgctcctc
tgggtgacagaccgtgacacgacccaagtttggtatagagatgaccaactgatcaagaca
ctttggtttgaggtcaacactgaagttgtcagtttgaaggcctacagcaagtccagccag
atgggcttcaacttctgctctgatgggaatggagactgcagtcacttctgtctggctgtc
cctggtggtaggacatgtaggtgtgcccatggccatcgaccagtcaatgctacacactgc
gccctagaccagcactgcccagctggtagtagaccctgtctggatgggcacacatgcctc
cccctggagaagttctgtgatgggcatcctgaatgccttgacacctcagatgagaattgt
gtccatctcaaagggcagtctgaagtccagtccaaagctccaaccctgcctccaagcccc
agcattcccacatctgcagatcttggctctaccacctctctggacaacagtgggctggtg
agaaacctggatgtcaagcagcagtgtagtgagaagcgctgtaatgggaatggggagtgt
gtggagaccaatgggggcacctcctgtgcctgtggtcaaggctacagtggagactcctgc
caagaccagctcgccaacaccatgcaaggcccactaatctatggggccgttggcctctgt
gctgcgattgtagttatcagtgtcctcgttgccgtggtcaggaggaagactgcaaacgca
aggcgagccagccctgtggtaaagcagaccagtatgactgacttggcgaaacatggagat
tctccctctacacaacattcacctgacgacactaacttttcagaggaagtggcatcatct
gtggcgtaa
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integrated database retrieval system
