Oncorhynchus kisutch (coho salmon): 109895754
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Entry
109895754 CDS
T09179
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109895754
04020 Calcium signaling pathway
109895754
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109895754
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109895754
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
109895754
NCBI-ProteinID:
XP_031686110
Ensembl:
ENSOKIG00005047148
LinkDB
All DBs
Position
LG8:36971393..37110770
Genome browser
AA seq
1887 aa
AA seq
DB search
MSMKMYGLGPMSYFHSSFNCFDFGVIIGSIFEVIWAVVKPGASFGISVLRALRLLRIFKV
TKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGLFNFDEETPTTNFDT
FPAAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSIYFIVLTLFGNYTLLNVFLAIA
VDNLANAQELTKDEEEQEVAITKKMALQKAKEVKEVSPMSAANISITALHSILYTGQHGS
ERAMPASFVKQSQGALSSSSSVCSVNSLKEQQKSLKMMSVWEQRTTQLRRHNLRASSEAL
YSELDPEERLRMSSALHIRPDMKTHLDRPLVVEPHDGPGPMGQHKPRTPEETDTPEDPAG
PQPRRHHRHRDRERPIDEANENGDPGKEGRHHVHHSRSKDPEGTRGKEGKSERSRSREGG
KRHHHQTLVDEGGGGGGTGEREHRHHHSHRQAREGNGTVNSGGKGERRSRHKDGRSGERC
SRGENGANGERRRHKTHGSRGQSTLEGEDHSEREKGRGHRNRYVESEGDSLAISPQQDPG
DQRWGTEGPEDSDNQRNVRRTGQTAVNIPPVTITPPPGETTLIPMNSIDCETMPMNEEKK
TLEERTQSGPRPILPYSSMFVFGQANVVRRLCHYIVSLRYFEMCILVVISMSSIALAAED
PVQANAPRNNVLKYLDYVFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSGAL
VAFAFSGSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYML
FMFIFAVIAVQLFKGKFFYCTDESKSLEKDCRGNFLDYDKDEVAAQPRVWKKYEFHYDNV
LWAFLTLFTVSTGEGWPDVLKHSVDATFEDQGPSPGYRIEISIFYVVYFVVFPFFFVNIF
VALIIITFQEQGDKAMSECSLEKNERACIDFAINAKQMTRYMPENVQSFQYRMWKFVVSP
PFEYSIMIMIALNTVVLMMKFHGAPDFYEAMLKHFNIVFTALFSLECILKIIAFGPLNYL
KDAWNVFDFVTVLGSITDIVVTEINTTDRLLNLSFLRLFRAARLIKLLRQGYTIRILLWT
FVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNEDTAITHHNNFRTFLQALMLLFRS
ATGEAWHEIMLSCLSHRACDERSGNLGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMD
NFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIRYNDMYNLLRIISPPLGLGKNCPNR
VAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIKLSSGMVAQRLSDAELKKELSTVWP
SLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRAKRLKEQQQQQQQQNAAGSQGK
VGALFKPILPLTYKQEKEKEKAINNMEPPCELLPQPQPQALPRPSSTLLNNMEPPCELLP
QPQALPRPSFTLLNNGGTLPGHDGTMKGSSSWVSEKSREVHRPRNKTPVQRGQSEDVPNT
TLPQESVEMRKMDTSDSTVPGPGSGLESQGRAVSMPRLNAELQRSQSRHSPGTLLAPVPD
CSPMKRSASTHAPHRPQEANLRDYTLETPSIQERPHHHHHHRCHHRRERDKKQRSLDRTP
STAGTPGDPAAEPSSRDRVQDRGRSHERKNHSTAGEKQRYYSCDRYGSREHCHTTKSATT
SCATSPSEVQDPSINKQGSGSVKCSPVMMTSGASTPSRGRRQLPQTPLTPRPGVAYKTAN
SSPVHFVSAQCSSGLPTLSPGRLSRGLSEHNALLHSGSSHIPSPVTRISSEPFLGYSHRE
AQGQGSLYCSLRDELLSPYAARARSPRTALPQMGPGPLHLPPPPQQSHAVPNGYHFTFGG
IGNASPESGSGARAPRYYHEADEDEWC
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaaaatgtatggactaggacccatgagctacttccattcttctttcaactgt
tttgacttcggagtgattataggcagtatttttgaggtgatctgggcagttgtgaaacct
ggggcctcctttggcatcagcgtcctgagagccctccgtctgctcaggattttcaaagtc
actaagtactggaactctctgaggaacctggtggtctctctactcaactccatgaagtcc
atcatcagcctgctgttcctcctcttcctcttcatcgtggtgtttgccctactgggcatg
cagctctttgggggactgtttaattttgacgaggagacgccaacaacaaactttgacacc
tttccagcagccattctcacagttttccagattctgacaggagaggactggaatgcggtg
atgtatcatgggatagagtcccaggggggcgtgcgccggggaatgttctcctccatctac
ttcattgttctcaccctgtttggaaactacactctcctcaatgtcttcttggccatcgct
gttgacaaccttgcaaacgcacaggagctcactaaggatgaggaagagcaggaggtggcc
atcaccaagaagatggctctccagaaggccaaggaggtcaaggaggtcagccccatgtcc
gccgcaaacatctccatcacagcgctacacagcatcctgtacacaggccaacatggatcg
gagagggcaatgccagcaagttttgtaaagcaaagtcaaggtgcactctctagcagctcg
tccgtctgcagcgttaattcacttaaggagcagcagaagtctctgaagatgatgtcagtg
tgggagcagcgaaccactcagctgagaagacacaacctgcgggccagcagtgaggccctg
tacagcgagctggaccctgaggagaggcttcgtatgtcctccgccctgcacatccgccct
gacatgaagacccacctggaccggcccctggtggtggaaccccatgacggccccggccct
atgggccaacacaagccccggacccctgaggagacggatacccctgaggacccggccggc
ccccagccacgcaggcaccaccgccaccgggacagggagagacccatcgacgaggccaat
gagaatggcgatccaggtaaagagggtaggcaccatgtccaccacagtcgtagcaaggac
ccagaaggcacccggggcaaggaggggaagagtgagcggtcacgcagccgagaggggggc
aagaggcaccaccaccagaccttagtggacgagggaggaggaggaggggggacgggggag
agagagcaccgccaccaccactcccacagacaggccagagagggcaacggcactgtcaac
agcggaggcaagggcgagcgcaggtcacgccacaaagatggccgctcgggagagaggtgc
tccaggggagagaacggagccaatggggagaggaggagacacaagacccacggctcaagg
ggccagtccacactggagggagaggaccacagtgagagagagaaggggaggggccacagg
aacaggtatgtggagtctgagggcgactccctggccatcagcccccagcaggaccctgga
gatcagaggtggggcacagagggacctgaagactcagacaaccagaggaacgtcagacgg
actggacagacggccgtcaacatcccccctgtcaccatcacccccccacccggggagact
acccttatacccatgaacagtatagactgtgaaaccatgcctatgaatgaggagaagaag
accctggaggagcggactcagagtggacccagacccatcctgccttacagctccatgttt
gtgtttggccaggccaacgtggtacggcgtctgtgtcattatattgtcagcctgcggtac
tttgagatgtgtatcctggtagtgatatccatgagtagcattgcattggctgcagaggac
cctgtccaggccaacgctccgcgcaacaatgtgctcaagtatctggactacgtcttcacg
ggagttttcacatttgagatggtgattaagatggttgacctgggcctcctgctccatcct
ggttcttacttcagagatctttggaacattctggacttcattgtggtcagtggcgcactg
gtggcatttgcattttcagggtccaaaggaaaggacatcagcaccatcaagtccctcaga
gttctgcgagtcttacggcccctcaagaccatcaaacgcctacccaagctgaaggctgtg
tttgactgtgtggtcaactccctgaagaacgtgttcaacatcctcatagtctacatgctc
ttcatgttcatcttcgctgtcatcgccgtgcagctgttcaagggaaagttcttctactgc
accgacgagtccaagagcctggagaaagactgcagaggtaatttcctggactatgataaa
gatgaggtggccgcccagcctcgggtgtggaagaagtatgagttccactatgacaacgtg
ctttgggccttcctcactctcttcactgtgtccaccggagagggctggcctgatgttctg
aagcactctgtggacgctacctttgaggaccagggtcccagtccaggctaccgtatagag
atctccatcttctacgtggtctactttgtggtcttccccttcttcttcgtcaacatcttt
gtggccttgatcatcattaccttccaggagcagggagacaaggccatgtcagagtgcagc
ctggagaaaaacgagagagcctgcattgactttgccatcaacgccaagcagatgacacgt
tacatgccagagaacgtgcagtccttccagtaccggatgtggaagtttgtggtgtcacct
ccgtttgagtactccattatgatcatgatcgccctgaacaccgtggtgctcatgatgaag
ttccatggagctccagacttctacgaggccatgttgaagcacttcaacatcgtcttcact
gccctcttctctctggaatgcattctgaagatcattgccttcggtccgctgaattacctg
aaggatgcctggaacgtgtttgactttgtgacagtgctgggaagtataactgacattgtg
gtcacagaaatcaatacaacggaccggctgttgaatctgagttttctgaggctgttcaga
gcagctcgtctcatcaagctgctgaggcagggatacaccatccgtatcctgctgtggacc
ttcgtccagtccttcaaggccctgccctatgtttgccttctgatagcgatgctgttcttc
atctatgccatcattggtatgcaggtgtttggaaacattgagctcaacgaggacacagcc
atcactcaccacaacaacttccgcacttttcttcaggccctcatgctgctgttcaggagt
gccacaggggaggcgtggcatgagatcatgctgtcgtgtttgagtcacagagcctgtgat
gagaggtcaggcaacctggggaaggagtgtggcagtgacttcgcctacttctactttgtc
tccttcatcttcctctgctctttcctgatgctcaatctgtttgtggctgtcatcatggat
aactttgagtacctgactcgagactcgtctatactggggcctcatcatctggatgagttc
atccgtgtttgggctgagtacgaccctgctgcctgcggacggattcgctataacgatatg
tacaacttgttacgaattatctcaccccctcttggcttagggaagaactgccctaatagg
gtagcgtacaagcggctagtcaagatgaacatgcccatcgctgatgacaatacagtccac
tttacctccactctcatggccctgatccgcacggccctggagatcaaactgtcctcaggg
atggttgcccagcgtctttctgatgctgaactgaagaaagagctctctacagtttggcca
agcctttcacagaagactatggatctgttggttacaccacacaaacccaatgagcttact
gttgggaaggtgtatgcagccctgatgatctttgactactacaagcagaaccgagccaag
aggctgaaggagcagcaacagcaacaacagcaacagaatgctgccggctcccagggtaag
gtgggggctctgtttaaaccaatactgcccctgacttacaagcaggagaaagagaaggag
aaggccatcaacaacatggagcctccctgtgaactacttcctcagccccagcctcaggcc
ctacctagacccagctccaccctgctcaacaacatggagcctccctgtgaactacttcct
cagcctcaggccctacctagacccagcttcaccctgctcaacaacggaggcacactgcca
ggccatgatggcaccatgaaaggatcgtcctcctgggtgtcagagaagtctagagaggtc
cacagacccaggaataagacacctgtccaaaggggccagtctgaagatgtcccaaacaca
acccttccccaggagtcagtggagatgaggaagatggacaccagtgacagcacagtgcct
ggtcctgggtctggactggagagccaggggagggctgtatccatgccccgcctcaacgca
gagctacagaggagccagtcacgccactccccggggaccctgctggcccctgttcctgac
tgcagcccgatgaagcgctctgcgtccacccatgccccacatcgcccccaagaggcaaac
ctgcgtgactacaccctggagacgcccagcatccaggaaaggcctcaccaccaccaccac
caccgctgccaccaccgtagagagagggacaagaagcagcggtcactcgacaggacgcca
agcaccgctggtacaccaggagacccggctgcagagccctcgtctagagacagggtgcag
gaccgcggccgctcccatgagagaaagaaccactcgacggcgggggagaagcagcggtac
tactcctgcgatcgctacggcagcagggaacactgccacaccaccaagtctgccaccacc
agctgtgccacctcccccagcgaggtgcaggaccccagcatcaacaagcagggtagtggt
tcggttaaatgcagcccagtgatgatgacctcaggggctagcacacccagccgtggacgc
aggcagctaccccagacccccctgaccccccgccccggggtggcctacaagactgccaac
tcctcccctgtgcactttgtgtctgcccagtgtagcagtggcctgcccaccctgagtcct
ggccggctgagccgcgggctgtctgagcacaacgccctgctacacagtggctcctcccac
atcccctcccctgtcacccgcatcagctctgagcccttcctgggttacagtcacagggaa
gcccagggccagggcagtctgtactgcagcctccgggacgagctgctgagcccctatgct
gccagagcacgctcccctcggaccgcactgcctcagatggggccggggcccctccacctg
cctccgccaccccagcagagccatgcggtgcccaacggataccacttcacctttggtggt
attggcaacgccagcccggagtctggctctggcgccagggcacccaggtactaccacgag
gcagatgaggatgaatggtgctag
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