Oncorhynchus kisutch (coho salmon): 109895770
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Entry
109895770 CDS
T09179
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1
KO
K18723
nucleoporin GLE1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
oki03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109895770 (gle1)
03015 mRNA surveillance pathway
109895770 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109895770 (gle1)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109895770 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
109895770
NCBI-ProteinID:
XP_020345330
Ensembl:
ENSOKIG00005044472
UniProt:
A0A8C7KGU6
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All DBs
Position
LG8:complement(35837898..35844831)
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AA seq
722 aa
AA seq
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MPAESLRWDTLEALKNSPKGRLKYNPDWLEKGEDILSGCNEAPSLSPLSGLILKRLNMSP
RALQKTCSLGSASTDPSTGLSEEAPVSSTSPFPSANAQPTPLSSPLLVPRLKKDTEQIVG
DEDSAPDASNNLSPVTNPIPSPTISLLSPRATQMEGCIRICEEKHRAKAKMELSLRQELQ
EKLVASVASRESEQLKRFEELMELKQRQEYQSIMDMMERETQESIGRQEKLKEEHKNRIK
ILNLRLREAEQQRLREVEFERQRQVEGRERLRALNAIQEEILQLNQLLEPAAPTQSGPSP
DLTSYSTRANQLCSQVSEVVRMTAEGEFPSVEDMTVAERALHEMRSLIRVMQEVAAQAQE
KRKKEQEEEEERRKMAMLQAQQEEQKKSAALSAKEKARKKGLQTKAEQSTLKWYQELQDS
ANQCAQSFEGLNNTKDIQTKKLRMELQKAATIPVSQISSISGSKLREIFDKIDKLLSGRS
VVSGGKSVSTSQHPNGLDFVSHKLAEKFVKQGEEEVASHHEAAFPIAVVASGVWELHPKV
GDFILAHLHKKCPYAVPHYPPMKDGTSVEEYQKILGYRVEDGGVEAQDSFLKRMSGMIRL
YAAMIQLRWPYGSKQGPDPHGLNNGWRWLAQMLNMEPLADVTATLLFDFLEVCGNALMKQ
YQVQFWKLILLIQEEYLPRIEAVTSQGQAGSVTRLKQFLESSLRSRQIPPPKGQLSSHFW
RS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaaagtttacgatgggatacattggaggccttgaaaaactcaccaaaggga
agactgaaatacaacccagactggctcgaaaagggggaggatattttgtcaggttgtaat
gaagctcctagcttgtccccactctctgggctcatcttgaagaggcttaacatgagccct
cgagcgcttcagaagacctgctcattgggctctgcttccactgacccaagcacaggcctg
tctgaggaggccccagtctcctcaaccagccccttcccttcagccaatgctcagcccact
cccctctcttctccactactggtccccaggttgaagaaagacacagagcagattgttggt
gatgaggacagtgccccagatgccagcaacaatctcagtccagtcaccaaccccattcct
tctcccaccatctcactgctgtctcccagggcaactcaaatggaaggatgtatacgcatt
tgtgaggagaaacatcgtgccaaagctaagatggagctgagtctgaggcaggagctgcag
gagaagctggtggcctcagttgcgagtcgtgagtcggagcagctcaaacgctttgaggag
ttaatggagctgaagcagagacaggagtaccagagtataatggacatgatggagagagaa
acacaagaaagcattgggcgccaagaaaagttgaaagaagagcacaagaacagaataaag
atcctgaacctgcgcctgcgggaagcggagcaacagcgtttgcgggaggtggaatttgag
aggcagagacaggtggagggtagggagagactgcgtgctctcaatgccatccaggaagag
atacttcaactcaatcagctcctggagccggccgcacccacccagtcaggcccctcccct
gatctcacatcctatagcacccgtgccaaccagctatgctcccaggtgtcagaggtggtg
cgcatgacagcggagggggagttccccagtgtggaggacatgacggtggcagagcgggca
ctgcatgagatgaggtcactgatccgggtgatgcaagaggtggctgcccaggcccaggag
aagaggaagaaggagcaggaggaggaggaggaacgcaggaagatggcaatgctgcaggcc
cagcaggaagagcagaagaagagtgcagctctgtcagccaaagagaaggcacggaaaaag
ggcctgcagaccaaagctgagcagagcaccctgaagtggtaccaagagctgcaggactcc
gctaaccagtgtgcacagtcttttgaaggcttgaacaacaccaaggatattcagacaaag
aaactaagaatggagctccagaaggcagccacaatccctgtcagccagatctccagtatc
tcaggttccaagctcagggaaatatttgacaagattgacaagctgttgtctgggagatca
gtggtatccggagggaagtctgtctccacctcccagcatcccaacggcctggactttgtc
agccacaaactggccgagaagtttgtgaaacaaggagaggaggaggtggcgtcccaccac
gaggcagccttccccatcgctgtggtggcctctggggtgtgggagcttcaccccaaagtc
ggagacttcatcctcgcccaccttcataagaaatgcccatacgccgtgccccactaccca
cctatgaaggatggcacatctgtagaggaatatcagaaaatcttaggctaccgtgtggaa
gatggaggggtggaagctcaggacagctttttgaagaggatgtcaggaatgatccgcctc
tatgctgctatgatacagctcagatggccttatggctccaagcaagggcctgacccacat
gggctgaacaacggctggcgctggctggctcagatgctgaacatggagcccctggcagac
gtcacggcaacactcctttttgacttcctagaggtctgtggcaacgccctgatgaagcag
tatcaggttcagttttggaagctcattctgctcatccaagaggaatacttgccaaggatt
gaagctgtcaccagccaaggccaggcgggctcagtcacgaggctcaagcagttcctggag
agttcattaagaagcaggcagatccctccccccaaaggccagctgagctcccacttctgg
agatcctga
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