Oncorhynchus kisutch (coho salmon): 109895804
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Entry
109895804 CDS
T09179
Symbol
msi1
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109895804 (msi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109895804 (msi1)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109895804 (msi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
NID
PHM7_cyt
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109895804
NCBI-ProteinID:
XP_020345384
Ensembl:
ENSOKIG00005029717
LinkDB
All DBs
Position
LG8:34939311..34969297
Genome browser
AA seq
369 aa
AA seq
DB search
MDTEGSQSSLSSTDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRS
RGFGFVTFVDQAGVDSVLAVTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKAYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEMHFHEINSKMVE
CKKAQPKEVMSPTGSARGRTRVMPYGMDAFMLGIGMLGRGQHCFTQTQTHDCPFTIGYPG
FQTATYTSRSYTGITPGYTYQFPEFHLERTPLLTSPHPPELTAIPLSAYGPMAVAAAVAR
GSAPSRSGGFGSPGPMADLYAAANQESAVSSYLSAASPSPNTGFGHSLGVRHSPYHGPLI
ATAFTNGYH
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggatacggaagggagccagagcagcctgtcctccacggactcccctcatgacccctgc
aaaatgttcataggcggtctcagctggcagacgacacaagagggattgaaagagtacttt
tgcaagtatggcgaggtgaaggagtgcatggtgatgcgggatccagttaccaagcgctct
aggggttttggatttgtcacgtttgttgaccaggccggtgtggattcagttttggcagta
accaggcatgagttggattcaaaaacaattgatccgaaagttgcattccctcgtagagcc
cagcccaagttagtgactcggaccaagaagatttttgttggaggtctgtccgtgaacacg
accattgaggatgtcaaggcgtatttcgagcagttcggaaaggttgatgatgccatgctc
atgtttgacaagaccaccaacagacacagagggtttggctttgtcacgtttgagaatgag
gatgtggtggagaaagtgtgtgagatgcacttccatgagataaacagcaaaatggtggag
tgtaagaaggctcagcccaaggaagtgatgtcacccacgggctcggccagggggcgcact
cgggtgatgccctacggcatggatgccttcatgctgggcatcggcatgctgggcaggggg
cagcactgtttcactcaaacacagacccatgactgtcctttcaccataggttacccaggg
tttcagacagctacgtatactagtcgaagttacactggcatcacccctggatatacctat
caattccctgaattccatttagagaggaccccccttctgacatcaccacatccccctgag
ctcacagccattcctctgtcggcatacggaccaatggcagtggcggcagcagtagcaaga
ggctccgccccctctcgctctggggggttcggcagccctgggccaatggcagacttatat
gcagcagccaatcaggagtctgctgtcagcagttacctcagcgctgcaagcccctcccca
aacactgggttcggccatagtctgggggtaagacacagcccttatcacggtcctctgatt
gctacggccttcactaatggctaccactga
DBGET
integrated database retrieval system
