Oncorhynchus kisutch (coho salmon): 109895820
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Entry
109895820 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109895820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109895820
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109895820
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109895820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-RING_UBOX
WWE_5
zf-rbx1
zf-C3HC4
zf-RING_2
zf-ANAPC11
zf-RING_5
zf-RING_Vps41
zf_RING_Vps8
PHD_NSD
zf-RING_16
zf-UDP
Motif
Other DBs
NCBI-GeneID:
109895820
NCBI-ProteinID:
XP_020345416
Ensembl:
ENSOKIG00005026547
LinkDB
All DBs
Position
LG8:34348947..34416735
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AA seq
653 aa
AA seq
DB search
MARPGSGVLVSVNGLGYPPQNLARVVVWEWLNEHGRWRPYSAATCHHIENVLKGDVRGTV
VLGQVDAQLASYIIDLQSMHQFRQDTGTMRPVHRNFYEPSSAPGKGVVWEWENDSGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMVQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCSCQQCILVNSTRAASNAILASQRRKLYGGAAGAPGATGTL
NVVRQSNTFAGTTLWSPTSGAGSNNIQHNNISAGSGQAKVEQVQSPLSSSNFPCSPALPS
LPLAHGHSHTHAHSHGHHVIINGQNNLNRPGTQRISMGTARGAIPPGVPALPVKNLTGSG
PVHPAIAGMTGILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGVNGIRRKTKKKHLR
KGKTPEDVVRRYTEKVKVAPDEDCTICMERLVTSSGYEGVLQHKGIKPEMVGKLGKCGHI
YHLLCLVAMYNNGNKDGSLQCPTCKAIYGEKTGTQPPGKMDYHVIPHCLPGYLEAKTIRI
VYDIPAGIQATEHPNPGKKFSARGFPRHCYLPDNDKGRKVLKLLIMAWDRRLIFTIDTSS
TTGESDTVVWNEIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVVEDNLKD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcacggccaggctctggggtgctggtgtcggtcaacgggctggggtaccctcctcag
aacctggcccgggtggtggtgtgggagtggctgaacgaacatgggcgctggcggccctac
agcgcggcaacgtgccaccacatagagaacgtactgaagggggacgtgcgggggactgtg
gtccttggacaggtggatgcccagctggcctcttacatcatcgacctgcagtccatgcac
cagtttagacaggacacaggcaccatgaggccggtccacaggaacttctatgagccatcc
tcggccccggggaagggtgtggtgtgggagtgggagaacgacagcggctcctggacgccc
tacgacatggagatctgtgtgaccatccagaacgcctatgagaagcagcacccctggctg
gacctgacctctctgggcttctgctacctcattgacttcaacagtatggtccagaccaac
cggcagagccagaggaaacgccgcctgcgccgacgcatggacctggcctaccctctcatc
atgggctccatccccaagtcccagtcgtggcctgtgggcgccagctccggccaaccctgc
tcctgccagcagtgcattctagtcaacagcacgcgggccgcctccaatgccatcctggcc
tctcagcgtcgtaagctgtacggaggggccgcaggagctccaggggccacaggcacgctc
aatgtggtacggcagagtaacactttcgctggaaccacactctggtccccaacctccggt
gccgggagcaacaacatacagcataacaacataagtgcaggaagtggccaagctaaagtt
gaacaggtgcagtcgcctctgtctagttccaacttcccttgttccccggcactgccgtcc
cttccgcttgcacatggccactcccacacccatgcacactcccacggccaccatgtcatc
atcaacgggcagaacaacctgaaccggccaggaacccagcgcatttccatgggcactgct
agaggagccatcccaccaggggtcccggccctccctgttaagaacttgactggctctgga
ccagttcacccagcaattgcaggtatgacaggtatcctgatgtgtgctgctggcctgcct
gtgtgtctgacccgggcccctaaacccatcctgcacccgccgcccataaacaagagtgac
atgaagcctgtgcccggggtcaatggcatccgccgcaagaccaagaagaagcacctcagg
aaagggaaaaccccagaggatgtggtgcggagatacacggagaaagtgaaggttgcccct
gatgaggactgcaccatctgcatggagaggctggtgacgtcatcgggctacgagggtgtc
ctgcagcacaagggcataaagccagaaatggtgggcaagcttggcaagtgtgggcacatt
taccatctgctgtgcctggtggccatgtacaacaatggcaacaaggatggcagtctgcag
tgccccacctgtaaggctatctatggggagaagacaggcacacagccccctgggaagatg
gactaccatgtcatcccccactgcctgcccggctacctggaggccaagaccatccgcatc
gtctatgacattcctgctggcatacaggccacagagcatcccaacccagggaagaagttc
agcgctagaggctttccacggcactgctacctcccagacaatgacaagggcaggaaggtc
ctgaagcttctgatcatggcgtgggaccgtcgcctcatcttcaccatcgacacgtccagc
accaccggcgagtcagacacggtggtgtggaacgagatccaccacaagacagagtttggc
tccaacctgacagggcacggctacccagaccccaactacctggacaacgtcctgacagag
ctgtcagcccagggggtcgtggaggacaacctgaaggactga
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integrated database retrieval system
