KEGG   Oncorhynchus kisutch (coho salmon): 109895845
Entry
109895845         CDS       T09179                                 
Name
(RefSeq) methylosome protein 50
  KO
K13221  methylosome protein 50
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oki03041]
    109895845
   03036 Chromosome and associated proteins [BR:oki03036]
    109895845
Spliceosome [BR:oki03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    109895845
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    CHTOP-methylosome complex
     109895845
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_EML_2 WDR55 Beta-prop_EML EIF3I Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_SPT8 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_RIG_1st Beta-prop_SCAP NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_NWD2_C MIOS_WD40
Other DBs
NCBI-GeneID: 109895845
NCBI-ProteinID: XP_020345471
Ensembl: ENSOKIG00005000572
LinkDB
Position
LG1:complement(33349821..33354825)
AA seq 338 aa
MKSTVNTNMIKENRWNIPPNAPACMEKHLDSVQYRADGTLLLGASSLTGRCWLGSIWVYS
DPKQSPNEGFCKAGVQTEAGVTEAKWVSERGVLVASDSGAIELWELAEDESLLVNRFTKL
EHDHIVTSVSPAGSNHAVSGSMDCRIKVWDLSQGEVVSTYNAHSKPVTCVSCNPSDDSLF
LSCGQDGRLLLWDRRKPTKPASRLEVEPSCCPTSVAWHPHHRTTIAYGDELGRVTLKDFQ
GTEPAQTQSTHSRRVSSLAFSSHSAPLLASISDDCSVAVMNSELKETLRDRRHQDFVRGV
CWAPGGSDTLTTVGWDHQVLHHITGQDGPATGDSTSPP
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgaaaagtacagtaaataccaatatgatcaaggaaaaccgatggaacatacccccaaat
gcccctgcgtgcatggagaagcatttggactcggtgcagtacagggcagatggcaccctg
ttgctgggggcctccagtctgacgggcagatgctggcttggctccatctgggtctacagt
gaccccaagcagtctcccaacgagggcttctgcaaggctggtgtgcagacagaggctgga
gtcacagaggcaaagtgggtttcagagaggggcgtcctagttgcatctgactctggtgct
attgagctgtgggagctagcggaggatgagagtctgctggtgaatcggttcactaaactc
gaacatgatcacatcgtcaccagcgtgagccctgctgggtcaaaccacgccgtcagcggc
agtatggactgccgaatcaaagtctgggaccttagtcagggggaagtggtcagcacgtat
aacgctcactctaagccagtcacttgtgtgtcctgcaatccatccgatgactccctcttc
ctctcatgtggccaggatggccgtctgttgctttgggacaggaggaaacccaccaaacca
gcttctagattagaggtagagcccagctgttgccctacctcagtggcctggcatccccac
cacaggaccacaattgcctacggtgacgagctaggacgcgtgactctgaaagactttcag
ggcacagagcctgcccagacgcagagcacccacagccgtagggtctccagcctagccttc
tcctcacacagtgcccccttgctagcctccatcagtgatgactgctctgttgctgtgatg
aattcggagcttaaggaaacgttgagagacaggaggcaccaggactttgttcggggtgtc
tgctgggcccctggtggttctgacacactgaccaccgtgggctgggaccaccaggtcctc
caccacatcacaggacaggatggaccggccactggtgactccacgtccccaccgtag

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