KEGG   Oncorhynchus kisutch (coho salmon): 109895852
Entry
109895852         CDS       T09179                                 
Symbol
ciao1
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein CIAO1 isoform X1
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oki03036]
    109895852 (ciao1)
   03400 DNA repair and recombination proteins [BR:oki03400]
    109895852 (ciao1)
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    109895852 (ciao1)
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109895852 (ciao1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_RIG_2nd ANAPC4_WD40 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR75_1st WD40_Gbeta Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML eIF2A Beta-prop_WDR41 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SCAP WDR90_beta-prop_4th B-prop_COPA_B_2nd Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_ELP1_1st Tricorn_2nd RMC1_N
Other DBs
NCBI-GeneID: 109895852
NCBI-ProteinID: XP_020345481
Ensembl: ENSOKIG00005016069
UniProt: A0A8C7G7I6
LinkDB
Position
LG8:32081043..32083245
AA seq 332 aa
MKDTLALLQKFNAHPDSRCWYVAWNPKGTLLASCGGDRAIRIWGREGDSWECKTVLQDGH
QRAVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPTGNLL
ATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEE
DDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDRTVKIWKECQPGGGQGTDTAWKCVC
TLSGFHGRTVYDIAWCPLTGALATACGDDGVRVFKEDETADPDQPVFSLSAHVPKAHSQD
VNCIAWNPKEAGLLVSCSDNGEIAVWNYQSEV
NT seq 999 nt   +upstreamnt  +downstreamnt
atgaaggacactttggcccttctacagaaattcaacgcgcatccagattcccgctgttgg
tatgttgcatggaaccccaagggcacattgctggcctcgtgtggcggtgaccgggccatt
cggatatggggaagggaaggtgactcttgggaatgcaagacagtgctccaggatggacac
cagagagctgtcagaaaggtggcatggtccccatgtggaaactacctggcctcagccagc
tttgatgccacaacctgcatctggaagaagaagaatgatgactttgagtgcttgacagtg
ttagaagggcatgagaatgaggtcaaatgtgtggcttgggccccaaccggtaacctgctg
gccacatgtagcagagacaagagtgtctggatctgggaggtggatgaggaggatgagtat
gagtgtgtgagcgtggtgaactctcatacacaggatgtcaagcatgttgtctggcatcca
acacaggagcttctggcctcgtgtagctacgacaacaatgtgtgtgtctataaagaagag
gatgatgactgggagtgcagggcgaccttggagggtcacacctccactgtctggggtttg
acctttgacccaagtggccagagactggcatcgtgcagtgatgaccgtactgtgaagatc
tggaaagaatgtcagcctggaggtgggcagggcacagacacggcttggaaatgtgtttgc
accctttcagggtttcatggacggacagtgtatgatattgcatggtgtccgctgaccggt
gccctggcgactgcatgtggtgatgacggagtgcgtgtgtttaaggaggatgagacggct
gacccagaccagcctgttttctccctgtctgcccatgtacccaaggcccacagccaggat
gtcaactgtatcgcctggaaccccaaggaggctgggctccttgtctcctgcagtgacaat
ggggagatagccgtctggaactaccagtctgaggtctga

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