KEGG   Oncorhynchus kisutch (coho salmon): 109895880
Entry
109895880         CDS       T09179                                 
Name
(RefSeq) ras-related protein Rab-7a-like isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04137  Mitophagy - animal
oki04140  Autophagy - animal
oki04144  Endocytosis
oki04145  Phagosome
oki04148  Efferocytosis
oki05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oki00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    109895880
   04145 Phagosome
    109895880
   04140 Autophagy - animal
    109895880
   04137 Mitophagy - animal
    109895880
   04148 Efferocytosis
    109895880
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109895880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109895880
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109895880
   04031 GTP-binding proteins [BR:oki04031]
    109895880
Membrane trafficking [BR:oki04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    109895880
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109895880
  Exosomal proteins of other body fluids (saliva and urine)
   109895880
  Exosomal proteins of colorectal cancer cells
   109895880
  Exosomal proteins of bladder cancer cells
   109895880
GTP-binding proteins [BR:oki04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    109895880
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase PduV-EutP cobW ATP_bind_1 nSTAND3 Septin AAA_16 G-alpha AAA_7 AAA_22 NTPase_1 AAA_24 AAA_5 SRPRB MCM ATPase_2 NACHT NB-ARC AAA_14 ATP-synt_ab ABC_tran DAP3
Other DBs
NCBI-GeneID: 109895880
NCBI-ProteinID: XP_020345528
Ensembl: ENSOKIG00005017868
LinkDB
Position
LG8:30931865..30936449
AA seq 213 aa
MRKQGKANMASRKKILLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV
DDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASP
RDPENFPFVVLGNKIDLENRQVTTKRAQAWCTSKGSIPYFETSAKEAINVDQAFQTICRN
ALKQESEVETYDFPDQIKLRDDRPASSSDGCSC
NT seq 642 nt   +upstreamnt  +downstreamnt
atgaggaagcagggaaaggcaaatatggcctctcggaagaagattctacttaaggtgata
attcttggagactcaggagttgggaagacctctctcatgaaccaatatgtgaataagaag
ttcagcaatcagtataaggccacaatcggtgctgactttcttaccaaagaggtgatggtg
gatgacaggcttgtgacaatgcagatctgggacactgcagggcaggagagattccagtca
ttgggcgttgctttctatcgaggtgcagactgttgtgtccttgtgtacgatgttactgcg
ccaaacaccttcaagactcttgacagctggcgagacgagttcctgattcaagccagcccc
cgtgacccagagaacttcccatttgttgtgctcggcaacaagattgacttggagaacagg
caggtgacgaccaagcgagcccaggcgtggtgtacgagtaagggcagtatcccatatttc
gagacaagtgcgaaggaggccatcaatgttgatcaagcctttcaaactatttgccgaaat
gctctcaaacaggagtcagaagtggagacttatgacttcccagatcagatcaaactgagg
gatgacagaccagcctcctctagtgatggctgcagctgctga

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