Oncorhynchus kisutch (coho salmon): 109895912
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Entry
109895912 CDS
T09179
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109895912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109895912
Membrane trafficking [BR:
oki04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
109895912
Protein recycling
Other Rab GTPase associated proteins
109895912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
YtxH
Motif
Other DBs
NCBI-GeneID:
109895912
NCBI-ProteinID:
XP_020345593
Ensembl:
ENSOKIG00005005527
UniProt:
A0A8C7F4D8
LinkDB
All DBs
Position
LG8:complement(28703564..28708457)
Genome browser
AA seq
474 aa
AA seq
DB search
MAAEQQRGIRVTQAELLCKDACGYYGNPAWQGFCSKCWRERTRKAEADRQETGPHNDAGS
PLTFSKFEEKKNMEKGRKVNTMRRLFWGGPSPPKRPESSEGQVATLKAYQSIEPGDFTSF
LKLLRNPSSQRLQSRCTAFLNTMEAYHGLPVQKQSDLVQDFYQNIAVHFSSLSEIQVSQM
MEHMEKLIMTRLHKWVFCHDSCDDEVKDLALQRRIRSLNWVTPHMLSVPFPDERAEVVSD
PFLPAITAIIEMDAKRAPQDKLTCVCKCSQNVFQALSTSNSEPANADDYLSGLIYVVLKA
NPPRLHSNMQYVIRFGLPHSLMAGESGYYFTNLCCAVAFIEKLDGPALNLSPVEFEGYMQ
GRRAPSKRGSERQKMARETQDQLEDLKGRQEKVDQGINALKEQLQHWVQSVKAQIDEVTS
QSALTQEEIKAQSEFLQSHSVSTLTQADDVKDQSVLLLDGQESNNNTCLTEAEC
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagcagcaaagagggatccgagtcactcaagcagagcttctctgcaaggat
gcgtgtggttattatggcaaccctgcatggcagggcttttgctccaagtgctggcgagaa
cgaacccgtaaagcagaggcggacaggcaggagactgggccccacaatgatgcaggttct
cccctcaccttttctaaatttgaggagaagaagaatatggagaagggtcgcaaagtgaat
acgatgaggaggctcttctggggtggaccgtcccctcctaaacgcccagagtcttcagag
ggccaggtggctacattaaaagcctatcagagcattgagccaggggattttaccagcttc
ctgaagctgctgaggaacccatcctctcaacgtctgcagtcccgttgcactgctttcctc
aacaccatggaggcttatcacggcctgccagtgcagaagcaatctgaccttgttcaagac
ttttaccagaacatcgctgtgcatttcagtagtctttcagagattcaggtctctcagatg
atggagcacatggagaagctgatcatgacgcgtctgcacaagtgggtgttctgccatgac
agctgtgacgatgaagtgaaagacttggcactccagaggaggatacggtccttaaactgg
gtcaccccccacatgctgagcgtgcctttccctgacgagagggctgaggttgtcagtgat
ccctttctgcctgctataacagccataatcgagatggatgccaagcgcgcgccacaggac
aagcttacatgcgtatgtaagtgcagtcagaatgtcttccaggctctctccacttccaat
agtgagccagcaaatgctgacgactacctgtctggcctgatttacgtagtactaaaggcc
aacccaccccggcttcactccaacatgcagtatgtgatccgcttcggcctccctcacagc
ctgatggcaggagagagtggctactacttcaccaatttgtgttgtgcagtggccttcatt
gagaagctggatgggccagcactcaacctaagcccagtggagtttgagggctacatgcag
ggtcgccgtgctccctcaaagaggggcagtgagaggcaaaagatggccagggagacgcaa
gaccaactagaggacctgaagggtcgacaggagaaggtggaccaaggaataaatgccctc
aaagagcagctacagcattgggtacagtctgtcaaggcacagatagatgaggtaacatcc
cagtctgctctgacacaagaagaaattaaagcccagtcagagtttttgcaaagccattct
gtctctactctaacacaggcagatgatgtcaaagaccagtcagtgttgttgctagatggt
caagagtcaaacaacaacacttgtctaacagaggcagagtgttag
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