Oncorhynchus kisutch (coho salmon): 109895919
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Entry
109895919 CDS
T09179
Symbol
clip1
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
109895919 (clip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109895919 (clip1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109895919 (clip1)
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
109895919 (clip1)
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
109895919 (clip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
109895919
NCBI-ProteinID:
XP_020345610
Ensembl:
ENSOKIG00005005127
LinkDB
All DBs
Position
LG8:28541568..28596891
Genome browser
AA seq
2270 aa
AA seq
DB search
MSTTKPSGLKAPTKMGRSAGAPATKTTPSAAGSKVAAADKSTPGGGAAGTQDGGENFQVG
ERVWVNGNKPGVVQFLGEAQFAPGQWAGIVLDEPIGKNDGLVAGVRYFQCEALKGIFTRP
SKLSYTEGEANGTQTAPSSRAGSPTPSTASLASHTPSVKKASTATPATPAIPASNLARTN
SESISNLSDTSSVKKGERELKNGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGK
NDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTMVRKLVATPSGLKRSPSAS
SISSMSSVASSVSAKPSRTGLLTETSSRYSRKISGTTAVQEVLKEKQQHIEQLMAERDME
RAEVAKATTHVGEVEQELTLLREDQEQMEAKMDQLRTLVEAADKEKVELLNQLEEEKRKV
EDLQFRVEEACITKGDLETQTKLEHAHIKELEQSLLFEKTKAEKLQRELEDTRVATVSEK
SRIMELERDLVLRTREVADLRLRLEVQQSSEGSDSTTSPLLEEVSSLRAQLASQEDQQQV
ELAGLKEMLAAEEKAHSEAVSQFQVSSTKVSTDNEQLKLRLSQNEKENADVIELWRCKLE
STIASHQQAMEELKVSFSKGAGSQTTELVETKTALERLKVEHKQALEEAGARCEAEAAAR
ARETGELNKQLLVVSEEKECLEESLRSSVESAEEQHLVEMEDVLGKLHTAELKVNELEEH
EAKLVQQTQDRAKEVQEQVAAMEVLQSQAGQGNQALQNLRTQLEEAQSQARSQGNRVSEL
NSELEGKQQELLSLQQSLTSVLQDKVSLEQELGNLKQKLSESTDNQAKSTQTMQGLERKL
KAGEERLDQLANEKAKLQSDISDMMKSSGDSSAQLTKMNEEITQKKRSLEELQTQLTEEK
ERAACSEEQQQQEVAQKEQELKAARDKHQGQLSNLQGKITQLEKSLQQCEAQAKDLQTSQ
QKALSEASEHHAKQLQELQGQADKTKQELSVSREKAQELERLVTELQPYKEKAQFLSGEL
DYSGQHIERLSTDLEKQISLLAHMSRESSDLKAQEGSLKNQLSKLEAKLSASEASHQELS
GKTEELLTLRDKLTKEQEELCTTNRNLDGENASLSREVEKLRVAVEEAQANNKSLSQSEA
ERQSQIEELQKTNAEKHEVLLKYQQEILQQETKRKQLAEVYEKTCEERNELQQSREKLTS
EKDSLLLERDAARNAKKSLDAKNVELQARCQSLSLEKEDFCLKNTQLQAQTETLGKDKVE
MFTQINAAIFDKEALQALNAELQNQLNITKKDLEKSVRDKVELHASKMSLAKMLDQSKTS
SEVTDSERLHLLQEKEDLLATQRKVCSEKDELIKEREELKEKLRLSTEEVATSKEKVKEL
LSSFGEEKEALCLQNAETEKALHSIRKEKMAIELTLEKQNMESDCWVHEKEELEEKHTQE
ISEKCTLTKERDKLAGEICSMKDQLDSSAKANDDLKQANSNLTSLLEELKKKIEKVETEG
ASLKKEKVDLQAQLQKLCSEREALEKSKTELAEEHHELKGNSEQMRLEFIQQNDTLTKKQ
DHLLSQQTELNKSLQKDKEDLLLQVQEFKGQTESLSMAKMLLELQQQTEASDRSKLSSAK
DDLSRETEELQTQLFTLTQEKITLLQSESSLKAEVASVCVERDTMASERNSLRRHLGQLK
TTHTGLLGERRGLLEENVQMQVKVQDLTQQSVTREKAMDELSANLKDIGVERKALAGEVE
NLKAQLKERDQEKGDLAGDQICLSAKLEKLVNEVSSLAKEKVDLLVIQSRLEQDLSSLHS
SQESRDGEHSRLMGEVEKLQVNQTQLEADAQALRAEKSVMEGQHKASVEEASVSTKVREE
MATNLEDLKFQKDALLKERDKATQQVTQLEGQLKNAISKQLEAAESSGKTAEVVELLTQE
KGLLQQEKIEAQSLLEEFRSAKQEMTNQLDSLKQQNSKYKKELNLSKEQLSSENQKISGL
CQEIDKLKQATSVKSQSLVALQEENNKLTKELGSSKKETSGQQKLEAQQSKLNKQLQEMK
PRETTMKKKLDEEKAFFQKSIHKSSTLISEKDQELETLMSELSVLRGESAIAKTLKFTIQ
LLEKDKAQLQEHVQILEKSLSGGQDTVTSSSRDAALDQLRENKETAESQAAIEFLNSVIV
DLQKKNEELKGKLEKMAEAALNGNNASELDNYDGSYNKGPSKKKVPPRLFCDICDCFDLH
DTEDCPTQMQMPDSPPHTTYHGSKDEERAYCDICEAFGHWTDSCNDDQTF
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaccaagcccagcggactcaaagcgcccaccaagatgggtaggtcagcgggg
gcgccagccaccaagaccaccccctccgctgccggatccaaagtagctgcagccgacaag
tccactccaggaggcggtgcagctgggacacaagatggcggggagaactttcaggttggg
gagcgagtgtgggtgaatgggaacaaacctggcgtggtgcagttcctgggggaggctcag
tttgcaccaggacagtgggctggcatagtgttggatgagcccattgggaagaacgatggc
ttggtggcaggggtgcgctatttccagtgcgaggccctgaaagggatattcacccgcccc
tccaagctgtcctacacagagggcgaggccaatgggactcagacagcaccttcgtcccgg
gctgggtcgcccaccccctccaccgccagcctggcctctcacaccccctctgtcaaaaaa
gcctcaactgctacgcctgccacaccagccattccagcctccaacctggcacgcacaaac
agcgagtccatctccaacctctcagacaccagctcggtcaagaaaggggagagggagctg
aagaatggagaccgcgttttggttggtggcacaaaagctggtgtggttcgctttcttggt
gaaacagactttgccaagggagagtggtgtggtgtggaactggatgagcccctgggaaag
aacgatggggcagtggcaggaaccagatactttcaatgccaacccaagtatggcctgttt
gccccagtccacaaggtcacgcgtattggcttcccctccaccacaccggccaaggcaaag
accatggtgcggaagttggtggccacgccctcgggcctgaagcgcagccccagcgcctcc
tccatcagctccatgagctctgtggcctcctccgtcagtgccaagcccagccgcacaggc
ctgctgacagaaacgtcatcacggtactcgagaaagatctctggcaccacagcagttcag
gaggtgctgaaggagaagcagcagcacatcgagcagctgatggcggagcgggacatggag
agggcagaggtggccaaggcaaccacccatgtgggcgaggtggagcaggaactgaccctg
ctgagagaggaccaggagcagatggaggccaagatggaccaattacgcaccctggtggag
gctgctgacaaggagaaggttgagctgctcaatcagctggaggaggagaagaggaaagtg
gaggacctccagttccgcgtggaggaagcttgcattaccaaaggagacctggagacgcag
accaaactggagcatgcccacattaaggagcttgaacagagcctgctctttgaaaagacc
aaagctgagaaactccagagagagttagaagacactagggtggccacggtgtcagagaag
tcccgcatcatggaactggagagggacttggtgctgaggaccagggaggtggctgacctg
cggctgcgtctggaggtccagcaaagctcagagggctcagactccaccacctcccctctc
ctggaagaggtgagctctctgagggctcagctggcctctcaagaagaccagcaacaggtt
gagctggctgggctgaaggagatgctggcagcggaggagaaggcccacagtgaggcagtg
tctcagttccaagtctcatccaccaaggtctccacagacaacgagcagttgaagctgcgc
ctcagtcagaacgagaaggagaatgcagacgtcatagagctgtggcgctgcaagctggaa
tccaccatcgcttcacaccagcaggccatggaggagcttaaggtgtccttcagtaaaggg
gctggttcccagacgacagagctggtggagaccaagactgccctggagaggctgaaggtg
gagcacaagcaggcactggaggaggcgggagccaggtgtgaggcagaggctgcagcccgg
gcacgggagacaggggagctcaacaaacagctgctggtcgtgtcggaggagaaggagtgc
ctggaggagagcctgcggtccagtgtggagagtgctgaggagcagcacctggtggagatg
gaggacgtgctgggcaaactgcacactgctgagctgaaggtaaacgagctggaggagcat
gaagctaagcttgtccagcagacccaggaccgtgccaaggaggtccaggagcaggtggca
gctatggaggtcctgcagtcccaggcaggccaaggtaaccaagctctccagaacctgagg
acccagctggaggaggcccagagccaagctcgctcacagggcaacagggtcagtgagttg
aactctgagctggagggtaagcagcaggagctcctctccttgcagcagagcctgacctct
gtgctgcaagacaaggtctccttggagcaagagctgggcaacctgaaacaaaaactgtca
gaaagcacagacaatcaggctaagtcaacacaaactatgcaagggctggagaggaagcta
aaggctggagaggagaggcttgatcagctcgcaaacgaaaaggccaagctccaaagtgac
atctcagacatgatgaagtcatcaggcgacagttcagcacagcttaccaaaatgaatgaa
gaaatcactcagaaaaaaaggagtctggaagagttacagacccaactcacagaggagaag
gagcgggctgcatgttctgaggagcaacaacagcaggaagttgcccagaaggagcaggag
ctaaaggctgccagagacaagcatcagggccagctaagcaacctgcaggggaaaatcaca
caactggagaagagtttgcagcagtgtgaggcccaggccaaggatcttcagacctcccag
cagaaggccctgtctgaggcctcagagcaccatgccaagcagctccaggagctgcagggt
caggctgacaagaccaagcaggagctgagtgtctccagggagaaggcccaggagctggag
aggctggtgactgagctgcagccttacaaagagaaggctcagtttctttctggtgagctc
gactactccgggcagcatattgagagattgtccacagacctggagaagcaaatctcactg
ctggcgcacatgtctagggaaagctcagatctcaaagctcaggaaggaagtctcaaaaat
caactctctaaactcgaggccaagctctcagcttcggaggctagtcaccaggagctctca
ggtaagactgaagaacttctgacactgagggacaagctcacaaaagagcaggaggaactt
tgcaccaccaaccggaatctagatggagagaatgcctcactatccagagaggtggagaag
cttagagttgctgttgaggaggcacaggccaataacaaatccctcagtcaatctgaagcg
gagcgtcagtcccaaattgaggagcttcaaaagacaaatgcagagaagcatgaggtcctt
ttgaagtaccaacaggagatcctgcagcaggaaactaagaggaagcagctagcagaggtc
tatgagaagacctgtgaggagaggaatgagctccagcaaagcagggagaagctgacctct
gagaaggatagccttttgttggagagggatgcagccagaaatgctaagaaatcccttgat
gcaaagaatgtggagttgcaggcaaggtgtcagtctttaagcttggaaaaagaagacttc
tgtctgaaaaacactcagctgcaggcacagacagagaccttgggcaaagataaagtggag
atgtttactcaaattaatgctgccatttttgacaaagaggccctccaagccttgaatgca
gagcttcaaaatcagctgaatatcacgaagaaggatcttgagaagtctgtccgtgacaag
gttgagctacatgcttcaaaaatgagcctggccaaaatgctggaccagtccaagaccagc
agtgaggttaccgactctgagaggcttcacctcctgcaggagaaagaggacctgcttgct
acccagcgaaaggtgtgttctgagaaagatgaacttatcaaggagagagaagagttaaag
gagaagctcagactttctacagaggaagtggcaacctctaaggagaaagttaaagagctg
ttgtcatcttttggtgaggagaaggaagcactttgtctccagaatgcagagactgagaag
gcgctacactccatacgcaaagagaagatggctatagaattaacactggaaaagcagaac
atggagagtgactgttgggtacatgaaaaggaagagctggaagaaaagcacacacaggag
atctctgaaaagtgtactctaacaaaagagcgtgacaagctagcaggtgagatctgcagt
atgaaggaccagttggacagctccgctaaggccaatgatgacctgaagcaagccaattcc
aacctcacgtccttgctggaggaattaaaaaagaagatagaaaaggtggagactgaggga
gcttccttgaaaaaagaaaaggttgatctacaggcacagcttcagaagctttgctcagag
cgggaggcccttgaaaaaagcaaaactgaacttgcagaggagcatcatgaactaaaaggc
aactctgagcagatgcgtttggaattcattcagcagaacgataccctaacaaaaaagcag
gatcacctgctttcgcagcagacggagcttaacaagagcctgcagaaggacaaagaggat
ctgcttctgcaggtccaggagttcaaaggtcaaacagaatcactttcaatggcaaaaatg
cttcttgaattgcagcagcagactgaagcaagtgaccgaagtaaactgtcctctgcaaag
gatgacctctccagagagacagaggagttacagacacagttgttcactctgacacaggag
aagattactctcctgcagtctgaatccagcctgaaggcagaggttgcctctgtttgtgtt
gaaagagacacaatggcctctgagagaaatagtttgcgtaggcatttagggcaacttaag
acgacccacactggattgttaggtgagagacggggtctgcttgaggagaatgtccagatg
caagtcaaagtgcaggacctcactcaacaatctgtcaccagagagaaggccatggatgag
ttgtctgccaaccttaaggatattggagtggagagaaaagccttggctggggaggttgag
aacttaaaggcacagctgaaggagagggaccaggaaaagggtgacttggctggagaccaa
atatgcctgtctgccaagctggagaagcttgtcaacgaggtctcctccctggctaaggag
aaggtagacctcctagttatacagtcccgcctggagcaagacctttcctccctccacagc
agccaagagagtagggatggggaacattcaaggctcatgggggaggtagagaagctgcaa
gttaaccagacacagcttgaagcagatgcccaggccctacgtgctgagaagtcagtgatg
gagggacagcacaaagcctctgtggaggaggcatctgtgtctaccaaggtcagagaagaa
atggccaccaacctggaagacctgaagttccagaaggatgccttgctcaaggagagggac
aaagccacccagcaggtcacccagcttgagggtcaactaaaaaatgctatttccaaacag
cttgaggcagcggagtcctcagggaagactgctgaggtcgtggagttgctgacacaagag
aagggtcttctgcagcaggagaagattgaggcccagtctctgctggaggagttcaggagt
gccaagcaggagatgaccaatcagctggattccttgaagcaacagaattccaaatacaaa
aaggagctcaacctttctaaagagcaactcagctcagagaaccagaaaatcagtggcctg
tgccaggagattgataagctgaagcaagctacctctgtgaagtcccagtccctggtggcc
ttacaggaggagaacaacaagctgaccaaggagcttggcagcagcaagaaggagaccagt
ggccagcagaagctggaagctcagcagtccaagctcaataaacagttgcaagaaatgaag
ccgagagagaccacaatgaagaaaaagttagatgaggagaaagccttcttccagaaatcc
atccataaaagcagcaccttgatctctgagaaagatcaggagctggagaccctgatgagt
gagttatcagtgctgcgtggggagagcgccatagcgaagacactgaagtttactatccag
ttactggagaaggacaaggcacagctacaggagcatgttcagatcctggagaagagcctt
tcaggaggacaggatactgttaccagctcctcacgtgatgcagctctggatcaactaagg
gagaacaaggagactgcagaaagccaggcagcgattgagttcctgaactcggttatcgtg
gacctgcagaagaagaatgaggaacttaagggcaagctggagaagatggcagaggctgcc
ctcaatgggaataatgcaagcgagcttgacaactatgatggcagttataacaaaggcccc
tccaaaaagaaggtcccaccaaggctcttctgtgacatttgtgactgcttcgacctccat
gatacagaagactgtcccactcagatgcagatgccggactccccaccccacaccacctac
cacggcagtaaggatgaggagagggcttattgtgacatctgtgaggcctttggccactgg
actgactcctgtaacgatgaccagaccttctaa
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integrated database retrieval system
