Oncorhynchus kisutch (coho salmon): 109895938
Help
Entry
109895938 CDS
T09179
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109895938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109895938
Spliceosome [BR:
oki03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
109895938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
109895938
NCBI-ProteinID:
XP_020345645
Ensembl:
ENSOKIG00005003695
UniProt:
A0A8C7CT82
LinkDB
All DBs
Position
LG8:complement(28058712..28063220)
Genome browser
AA seq
494 aa
AA seq
DB search
MVSVKREREIDLEDDEVPVKIGRSSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHIN
VYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYV
LKPTFTRQHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPPLRNY
FLEEENYCGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQ
ITKQGDAVDFLSWFMNALHGALGGTKKKPSSLTKVFQGSMRIFSKKLPHPDLPPEEKVAL
LLKDEYQEEMSDTTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGNTEKEYKTY
KENFLKRFQLLKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEAQVTEK
NTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWK
RRESEDDTTNHTGA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggtatctgtaaaacgggagcgagaaattgacttggaagacgatgaagtacctgtgaaa
attggccgttcgtccgaggaccgcagaagtcgccattgtccctacctcgacacaatcaat
aggagtgtactggacttcgattttgagaagctatgctccatttccctctcccacatcaat
gtatacgcctgtctcatctgtgggaaatacttccaaggtagaggtctgaagtcccatgcc
tacactcacagtgtgcagttcacccaccatgtgttcctcaatctgcacaccctcaagttc
tactgtctaccagataactacgagatcattgactcatcgttggaagacatcacgtatgta
ctgaagcccacattcaccagacagcacatctctggattggataagcagggaaagctgtat
cgagcctatgatggcaccacctatctgcctggcatcgtagggctcaacaacatcaaggct
aatgactacgctaatgtggtgctgcaggccctgtccaatgtgcccccactgcggaactac
tttttggaagaggagaattactgcggcatccgtaggccgccgggtgacatcatgttcctg
ctggtgcagcgattcggtgagctgatgcgcaagctgtggaacccacggaacttcaaggcc
catgtgtcgccccacgagatgttgcaggccgtagtgctgtgcagcaagaagaacttccag
atcaccaagcagggggatgctgtggacttcctgtcatggttcatgaatgctctgcacggc
gcactgggaggaaccaagaagaaaccctcaagccttaccaaagtgttccagggttccatg
cgtatcttctccaagaagcttcctcacccagatttgccaccagaagagaaggtggctcta
cttctgaaggacgagtaccaggaggagatgtctgacaccaccttcctcttcttgaccctt
gacctccccacagctccgctgtataaggatgagaaggagcagctcatcatcccacaggtc
cccctcttcaacatcctggccaagttcaatggcaacacagagaaggagtataaaacatac
aaagagaatttcctcaagaggttccagttgctcaagctgcccccctatctcatcttctgc
atcaagaggtttaccaagaacaatttctttgtggagaagaaccccaccattgtcaacttc
cccatcacgaacgtagaccttcgtgagtatctgacagaggaagcacaggtcacagagaag
aacacaacctatgacctggtggccaatgtggtgcatgatgggaagcccactgagggggca
tacagaatacatgtcctgcatcatggcactggaaagtggtacgagctccaggacctgcag
gtgacagatatcctgccccagatgatcacactgtcagaggcttacattcagatttggaaa
agaagagagagcgaagatgacacaactaaccacactggggcatga
DBGET
integrated database retrieval system
