Oncorhynchus kisutch (coho salmon): 109895948
Help
Entry
109895948 CDS
T09179
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X5
KO
K12392
AP-1 complex subunit beta-1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
109895948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109895948
Membrane trafficking [BR:
oki04131
]
Endosome - Golgi transport
Others
AP-1 complex
109895948
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
PDS5
Cnd3
HEAT_GCN1
Arm
RTP1_C1
HEAT_EZ
XMAP215_CLASP_TOG
NELF-A_N
Arm_2
HEAT_spiro
API5
FANCI_S3
Alpha_adaptin_C
Transposase_22
Motif
Other DBs
NCBI-GeneID:
109895948
NCBI-ProteinID:
XP_020345661
Ensembl:
ENSOKIG00005050804
UniProt:
A0A8C7NC78
LinkDB
All DBs
Position
LG8:27525052..27565325
Genome browser
AA seq
965 aa
AA seq
DB search
MEWANQLCENRQFGSKMTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVG
KDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDANPLIRA
LAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDT
LKDLISDSNPMVVANAVAALSEIAESHPNSNLLDLNPQSINKLLTALNECTEWGQIFILD
CLANYTPRDDRESQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLPKDLDYYSTLLKKL
APPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIR
LASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVN
YVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADE
LLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGY
IYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLEELICHIGTLASVYHKPPSAFVEG
SRGVMHKRLPARTGSGESTESPDVGTAAGGSAPEAAPSIIPSQGDLLGDLLNLDMAPPTT
SGPPPPTTGMQMGGMDLLGGGLDSLLGGDIGGSPAMGAGFGAAPAVMPASLNAPVGGGLG
DLFDLGGVGMPMGAYIPPKIVWLPAMKAKGLEISGTFARRAGVIQMELILTNKAMSVMTD
FAIQFNRNSFGLAPAGPLQVLTPLGPNQTIEVSLPLSTVGPVMKMDPLNNLQVAVKNNID
VFYFSCQYPISMLFVEDGKMERQVFLATWKDIPNDNESQFQIKDCHLNSDAASSKLQGSN
IFTIAKRTVEGQDMLYMSIKLSNGIWVLAELRVQAGNSNYTISLKCRAPEVSQCVFQCYE
AVLKN
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggctaatcaattatgcgagaaccggcaatttggatccaagatgacggactct
aagtatttcacaactaccaagaaaggagagatctttgagctgaaagctgagctgaacagc
gataagaaggagaagaagaaggaggctgtgaagaaggtcattgcctccatgaccgttggg
aaggatgtcagtgccctgtttccagatgtggtgaactgcatgcagactgacaacctggag
ctgaagaagctggtctacctgtacctgatgaactatgccaagagccagcctgacatggcc
atcatggctgtcaacaccttcgtcaaggactgtgaggacgctaaccccctgatccgggcc
ctggctgtgcgtactatgggctgcatccgcgtggacaaaatcactgagtacctgtgtgag
cctctgaggaagtgtttgaaggacgaggacccctacgtgaggaagactgcagccgtgtgc
gtggccaagctccatgacataaacgcccagctggtggaggaccagggcttcctggatacc
ctcaaggacctcatctctgactccaaccccatggtggtagcgaatgccgtggcagccctg
tctgagattgcagagtcccaccccaacagcaacctgctggacctgaacccccagtccatc
aacaaactgctgacggccctcaacgagtgcacagagtggggtcagatcttcatcctggac
tgcctggccaactacaccccccgtgacgaccgcgagtcccagagtatctgtgagcgggtg
accccccgtctgtcccatgccaactctgcggtggtgctgtcggcggtcaaggtgctgatg
aagttcatggagatgcttcctaaggacctggactactatagcaccctgctgaagaagctg
gccccgcccctggtcaccctgctgtctgcagagcctgagctgcagtacgtggccctgagg
aacatcaacctcatcgtacagaaacgcccagagatcctgaagcatgagatgaaggtgttc
tttgtgaagtacaacgaccccatctatgtcaagctggagaaactggacatcatgatccgc
ctggcgtctcaagccaacatcgcccaggtgctggcagagctgaaggagtatgccactgag
gtggatgtggactttgtgcggaaggcagtccgagccatcggccgctgtgccatcaaagtg
gagcaatcagcggagcgctgtgtgagcaccctgctggacttaatccagaccaaggtcaac
tatgtggtgcaggaggccatcgtggtcatcaaggacattttccgcaagtaccccaacaag
tatgagagtgtgatcgccacgctgtgtgagaacctggactctctggatgagccggaggcg
cgggcggccatgatctggatcgtaggagagtacgcggagaggattgacaacgctgatgag
ctgctggagagcttcctggagggcttccacgacgagagcacccaggtgcagctgcagctg
ctgacagccatagtgaagctgttcctcaagaaacccactgagacccaggagctggtgcag
caggtgctcagcctggccacacaggactctgacaacccggacctgcgagaccgtggctac
atctactggcgcctgctctccactgaccccgtggctgccaaggaggtggtactggccgag
aagcccctgatctcagaggagactgacctgattgagcccaccctgctggaggagctcatc
tgccacatcggcacgctggcttccgtctaccataaaccccccagcgccttcgtggagggc
agccgcggtgtgatgcacaagaggctccctgcccgcactgggtcaggagagagtacggag
agcccagacgtgggcactgctgctgggggctctgcccctgaggctgctccctctatcatc
ccctcccagggagacctcttgggggaccttctcaacctggacatggcaccccccaccacc
agtggccccccaccccccaccaccggcatgcagatggggggcatggacctcctgggtgga
ggtctggacagcctgcttggaggagatattggtgggagtcctgcgatgggggcaggtttt
ggggcggctcctgctgtgatgccagcctccctcaacgccccagtggggggtggcctagga
gacctgtttgacctgggtggggttggcatgccgatgggagcatatattcctcccaaaata
gtgtggctcccggccatgaaggctaaaggtctggagatttctgggaccttcgctcggcgt
gctggagtcatccagatggagctgatcctcaccaacaaggccatgagcgtcatgaccgac
tttgccatccagttcaacaggaacagttttggactggcccctgccggccctctccaggtc
ctcacccctctcggcccaaaccagacaattgaagtcagcctccccctcagcactgtcggg
ccagtcatgaagatggatcctctcaacaacctgcaggtggctgtgaagaacaacattgac
gtcttctacttcagctgccaataccccatcagcatgctgtttgttgaagatggaaagatg
gagcgtcaggtgttcctggccacatggaaagacattcctaatgacaacgagtctcagttc
cagatcaaagactgtcatctcaactcagatgcagccagcagcaagctgcagggcagtaac
atcttcaccatagccaagcgcacagtggagggccaggacatgctttacatgtccatcaaa
ctgtccaatggcatctgggtgctggctgaactgagggtgcaggctggaaactccaactac
acgatctctctgaagtgcagagcaccagaggtgtcccagtgtgtgttccagtgctacgag
gcagtgctgaagaactga
DBGET
integrated database retrieval system
