KEGG   Oncorhynchus kisutch (coho salmon): 109895971
Entry
109895971         CDS       T09179                                 
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
  KO
K11851  ubiquitin carboxyl-terminal hydrolase 30 [EC:3.4.19.12]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:oki00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    109895971 (usp30)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:oki01002]
    109895971 (usp30)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109895971 (usp30)
   04121 Ubiquitin system [BR:oki04121]
    109895971 (usp30)
Enzymes [BR:oki01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     109895971 (usp30)
Peptidases and inhibitors [BR:oki01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   109895971 (usp30)
Membrane trafficking [BR:oki04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    109895971 (usp30)
Ubiquitin system [BR:oki04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    109895971 (usp30)
SSDB
Motif
Pfam: UCH UCH_1 DUF5700
Other DBs
NCBI-GeneID: 109895971
NCBI-ProteinID: XP_020345707
Ensembl: ENSOKIG00005050258
LinkDB
Position
LG8:complement(26641623..26651134)
AA seq 504 aa
MPWCRSATSEKLIREFLYSGTIVRNKIMKNWGVIGGIAAAMAAGVYVLWGPITDSKKRKK
GMVPGLLNLGNTCFMNSLLQGLAACPSFVKWLEEFTSRKGVSEGEPEKDPKLSTTLLQLL
QALSNDNTGEEDVLDAGRLLEVLRLYRWHISSFEEQDAHELFHVLTSSLEEERDRQPKVT
HLFDIQSLESLPDIDDKTLSCKSRGPLHPLRSPWKFPHPFHGRLTSNMACKRCEQQSPVR
YDSFDSLSLSIPSPQWGWPISLDHCLQHFISSETIKEVECENCTKLQQGTLVNGHVLESQ
RTTFIKQLKLGKLPQCLCIHLQRLTWSNEGTPIKRQEHVQISEYLSMDHYKHRTTIQRLQ
VINCTPKTIKAEDSGEAADKTPLNGKDIEHHNNNKPLSNGTCSSVFLHSPGLNPQVNLTY
DYSSSEYHFQLMAVLVHHGDMNSGHFVTYRRCPPTPHSPSPFSSQWLWVSDDSVRKASLQ
EVLSSNAYLLFYERVRRLRLLLEE
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgccgtggtgcagatcagcgacatctgaaaagcttattcgggagttcctgtactctggt
accattgtcaggaataaaattatgaaaaactggggagtcattggtggaatagcggctgcc
atggctgctggagtatatgttctatggggtccaattacagacagcaagaaaaggaagaaa
ggcatggtaccaggcctgctgaacctgggaaacacctgcttcatgaactctctgctccag
ggcctggcagcctgcccatccttcgtcaagtggctggaggagttcactagccgcaaaggt
gtgtcggagggcgagccagagaaggaccccaaactttccacaactctcctgcagcttctc
caagcactgtcaaacgacaacactggggaggaggatgtgctggatgcagggcgtctgctg
gaggtactcagactctacaggtggcacatcagttcctttgaggaacaggatgcccatgag
ctcttccatgtcctcacctcttccttggaggaggagcgagaccgacagcccaaagtcacc
cacctctttgacattcagtcccttgagagtctcccagatatagatgataagaccttaagc
tgcaagagtcgaggccctcttcatcctttacgaagtccttggaagtttccacatcctttc
catggccgcctaacaagcaatatggcttgcaagcgttgcgaacaacagagtccagtgcga
tatgactctttcgacagcctctccttatccatcccttcgccgcaatggggctggcctatc
tctctggatcactgtctccagcatttcatctcttcagagaccattaaagaggtggagtgt
gaaaactgcaccaagcttcaacaaggcaccttggtgaatgggcatgtcctggaaagccag
aggacaaccttcatcaaacagcttaaactgggaaagctcccacagtgtctctgtattcac
ctgcagagactgacatggtctaatgagggtacgcccataaagagacaggaacatgtccag
atctcagagtacctgtctatggaccactacaaacaccgcacaaccattcagaggctccag
gtcatcaactgtactcccaaaaccattaaagcagaggattcaggagaggctgcagataag
acccctctcaatggcaaagatatagaacaccataacaacaacaagccactgtccaatgga
acctgttcgtctgtctttctccattctcctgggttgaacccacaggtcaacctcacatat
gactacagctcctcagaataccactttcaactgatggctgtgttggttcaccatggtgac
atgaactcaggacactttgtcacttaccgccgctgccctcccacgccccacagcccctct
ccattcagctcccagtggctgtgggtttcagatgactctgtacgcaaggccagtctgcag
gaggtgctgtcctccaacgcctacctactcttctatgagcgggtgagacggctccgtcta
ctgttggaggagtag

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