Oncorhynchus kisutch (coho salmon): 109895972
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Entry
109895972 CDS
T09179
Symbol
ung
Name
(RefSeq) uracil-DNA glycosylase isoform X2
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109895972 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oki03400
]
109895972 (ung)
Enzymes [BR:
oki01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
109895972 (ung)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
109895972 (ung)
Prokaryotic type
109895972 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
109895972
NCBI-ProteinID:
XP_020345710
Ensembl:
ENSOKIG00005050249
LinkDB
All DBs
Position
LG8:complement(26631573..26639412)
Genome browser
AA seq
306 aa
AA seq
DB search
MLAMKVPYLRRSPIMFLAAPLTATRVSPTLHFAQYTKVGRVKKLKLSGNGTTESPSSPVC
PELLARIAKNKQAALEKLSASNTPDEFGESWRKSLVSEFGKPYFRNLMSFVDGERKLNTV
YPPPQHVFTWTQMCDIKDVKVVVLGQDPYHGPNQAHGLCFSVQRPIPPPPSLLNMYKELA
SDIEGFQHPGHGDLTGWAKQGVLLLNAVLTVRAHQANSHKDKGWETFTDAVVQWLSSNRE
GLVFMLWGAYAQKKGAAIDRKRHHVLPTVHPSPLSAHRGFFGCKHFSKTNELLEKSGKEP
IDWKAL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcaatgaaggtaccatatttgagacgttctccaataatgtttttagctgcacca
ttaacagccacacgtgtttcaccaaccttgcattttgctcaatataccaaggttggacgg
gtgaagaagctgaagctatcaggcaacggaacgacggagtcaccttcttctccagtgtgt
ccagaactgctggcccgaatcgccaaaaacaagcaagctgcgttggagaaactgtcagcc
agtaacacaccggatgaatttggggagagttggagaaagagtttggtgtctgagtttgga
aagccttatttcagaaacttgatgtctttcgttgatggagagaggaaactgaacactgtc
tacccaccccctcagcatgttttcacctggacacagatgtgtgacatcaaagatgtcaag
gttgtagtcctcggtcaggacccatatcacggtccaaaccaagctcatggattatgcttc
agtgttcagagacctatcccacctccacccagcttgttgaatatgtacaaagaattggcg
tctgatatagagggcttccagcaccctggacatggagatttaactggatgggctaaacaa
ggtgtcttgctgctcaatgctgtgctgactgtccgagctcaccaggccaactctcacaaa
gacaagggctgggaaactttcactgacgctgtggtgcagtggctcagctccaaccgggag
ggcctcgtcttcatgctgtggggggcctatgctcagaagaagggagcagctattgatagg
aaacgtcaccatgtccttcccactgtacacccctcccctttatctgctcatcgaggcttc
tttggatgcaagcacttttccaagaccaatgagttgctggagaaatcagggaaggagcct
atagactggaaggcactttga
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