Oncorhynchus kisutch (coho salmon): 109896026
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Entry
109896026 CDS
T09179
Name
(RefSeq) clathrin heavy chain 1 isoform X2
KO
K04646
clathrin heavy chain
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04142
Lysosome
oki04144
Endocytosis
oki05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109896026
04142 Lysosome
109896026
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109896026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109896026
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109896026
Membrane trafficking [BR:
oki04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
109896026
Exosome [BR:
oki04147
]
Exosomal proteins
Proteins found in most exosomes
109896026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
Gp18_dom_I
IFS
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
109896026
NCBI-ProteinID:
XP_020345804
Ensembl:
ENSOKIG00005031734
UniProt:
A0A8C7MRD0
LinkDB
All DBs
Position
LG8:24846804..24888150
Genome browser
AA seq
1683 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIIDMADPNN
PSRRPISADSAIMNPTSKVIALKAAKCLQIFNIEMKSKMKAHTMTEEVMFWKWISVNTVA
LVTEAAVYHWGMEGDSQPIKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGEFKVEGNTKPSTLFCFAVRSQAGGKLHIIEVGHPATGN
QPFTKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYIHLYDLESGVCIYMNRISA
ETIFVTAPHESTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLGLRMAMRSNLAGA
DELFARKFNTLFAQGSYSEAAKVAASTPKGILRTAETIRKFQSVPSQPGQASPLLQYFGI
LLDEGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECCEELGDLVKAVDPTLALSVYL
RANVPSKVIQCFAETGQFQKIVLYAKKVGYSPDWVFLLRNVMRVSPEQGLQFSQMLVADE
EPLANINQIVDVFMEGSLIQQCTSFLLDALKNNQPAEGHLQTRLLEMNLLHAPQVADAIL
GNQMFSHYDRAHIAQLCEKAGLLQRALEHYTDLFDIKRTLVHTHLLNPEWLVNFFGALSV
EDSIECLRAMLSANIRQNLQLCVQVASKYHEQLGTNALVDLFESFKSFEGVFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPDRVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNTLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLKENTFY
DSTVVGKYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPYRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AIQVLIEHISNLDRAYEFAERCNEAAVWSQLARAQLQRDLVKEAIDSYIKADDPSAYMEV
VSAASKNDNWEDLVKFLQMARKKARESYVETELIFALAKTGRLAELDEFVNGPNNAHIQQ
VGDRCFEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFAC
VAGEEFRLAQICGLHIVIHADELEELISDYQDRGYYEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAVLTMMS
HPTDAWKEVQFKDIIAKLANVELYYKSLSFYLDYKPLLTNDLLTILSPRLDHSRAVTYFT
KMNQLKLVKPYLRSVQSHNNKGVNEALNNLLTEEEDYQGLRASIDAYGNFDTNALAQRLE
KHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELTETLLQWFLEE
GRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEVAEKVTVD
KLEESESQRKTEEKVPEPTPIVFGQQLMLTAGSAPVAPQPGYPGGYGYTAPGYPTQPPYS
YNM
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgccgatacgatttcaggaacatctgcagctgcagaacctaggggtg
aatccggccaacatcgggttcagctacctgaccatggagtctgacaaattcatctgcatc
cgggagaaggtgggtgagcaaaaccaggtggtgatcatagacatggctgaccccaataac
cccagcaggcgacccatttccgctgacagcgccattatgaaccctacaagcaaggtcatc
gccctgaaagctgctaagtgcctgcagatcttcaacattgagatgaagagtaagatgaag
gctcacaccatgacagaggaagtcatgttctggaagtggatctctgtcaacaccgtcgcc
ttggtgactgaagcggccgtctaccattggggcatggagggggactctcagccaatcaaa
gtgtttgatcggcacgccagtctggccggttgccagatcataaactacagaacagacgaa
cagcagaagtggcttctgcttatcgggatctcggcacagcaaaaccgtgtggtgggggcc
atgcagctgtactctgtggacaggaaggtgtcccagcccatcgagggacatgctgcagcc
ttcggagagtttaaggtggagggcaacaccaaaccctccactctcttctgctttgctgtg
cgcagccaggctggtggcaagctgcatatcatagaggtgggtcacccggctacagggaac
cagccatttaccaagaaggcggttgatgtgttcttccctcctgaggcgcagacagacttc
cccgtcgccatgcagattggcaccaagcatggcgtgatctacctgatcactaagtatggc
tacatccacctgtatgatctggagtcgggagtgtgtatctatatgaaccgcatcagcgct
gagaccatcttcgtcactgccccccacgaatccacctccggcatcatcggggttaacaag
aagggacaggtgttgtcagtgtgtgtggaggaggagaacatagtgaactatgccaccaac
gtgctgcagaacccagacctgggcctgaggatggccatgcgttctaacctggccggggca
gatgagttgtttgccaggaagttcaacacgctgttcgcccagggttcctactccgaggct
gccaaggtggctgcctccacaccaaagggtatcctgcgtacagcggagaccatccgtaag
ttccagagtgtgccaagccagccgggccaggcctctcccctgcttcagtactttggcatc
ctgctggacgaaggccagctcaacaagtttgagtctctggagctgtgcaggcccgtgcta
cagcagggacgcaagcagctgctggagaagtggctgaaagaggacaagctggagtgttgt
gaggagcttggtgacctggttaaggcagtagatcctactctggccctcagcgtctacctc
agggccaacgtacccagcaaggtgatccagtgctttgctgagaccggacagttccagaag
atagtgctttacgccaagaaggtgggctactctccagactgggtgtttctgttgaggaat
gtgatgcgggtcagtccagaacagggtctacagttctctcagatgctggttgcagatgag
gagcccctggccaacatcaaccagatagtggatgtgttcatggagggcagtctgatccag
cagtgcacctcattcctattggacgctctgaagaacaaccagccagccgagggacaccta
cagacacgcctactggaaatgaacctcctccatgctccccaggtggccgatgcaatcctg
ggaaaccagatgtttagtcactatgaccgagcccacatcgcccagctgtgtgagaaagct
gggctgctgcagagggctctagagcactacactgacctgttcgacatcaaaaggactctc
gtacacacacacctgctcaaccctgagtggctggtgaacttctttggcgccctgtcagta
gaggactctatagagtgtcttcgggccatgttatcagccaacatccgacagaaccttcag
ctgtgtgtccaggtggcatctaaataccacgaacagctgggaacaaatgccctggtggat
ctcttcgagtccttcaagagttttgagggtgtgttctacttcctgggttccatagtgaac
tttagccaggaccccgatgttcattttaaatacatccaggcagcctgtaagaccggacag
atcaaggaggtggaacgcatctgtagagagagcaactgttacgacccggacagggtcaag
aacttcctcaaggaggctaaactgacagaccagctgcctctgatcatagtgtgtgaccgc
tttgactttgtccatgacctggttctctacctctaccgcaacactctgcagaagtacatt
gagatctatgttcagaaggtgaaccctagccggctgccggtggtgataggaggtctattg
gatgtagactgtgctgaagatgtcattaagaacctgatcttggtggtgagaggacagttc
tccacagatgagctggtggcagaggtggagaagaggaacagactgaagctgttgttgccg
tggctggagtctcgtatccacgagggctgtgaggagccggctactcacaatgccttggct
aagatctacatagacagtaacaacaacccggagcgcttcctgaaggagaacaccttctac
gacagcactgtagtggggaagtattgtgagaagagagacccccacctcgcctgtgttgcc
tatgagaggggccagtgtgacctggaccttatcaaggtgtgcaatgagaactccctgttc
aagagtgaggctcgctacctggtcagacggaaagacccagaactatgggccaatgttcta
gaggagaacaacccttatagacgccaactcatagaccaggtggtgcagacagctctgtca
gagacccaggacccagaggaggtatcggtgactgtcaaggcctttatgacagctgacctg
cccaatgagctcatcgaactactggagaagattgtactggacaactcagtcttcagcgag
caccgaaacctccagaacctgttgatcctgacggccatcaaggcagaccggacacgtgtg
atggagtacatcaaccgcctagacaactacgacgccccagacatcgctaacatcgccatc
agcaacgagctcttcgaggaagccttcgccatcttcaaaaagtttgacgtcaacacctcc
gccattcaggttctgatcgagcatatcagtaacctggacagagcctatgagtttgcagag
cgttgtaatgaggctgctgtatggagtcagctggccagagcccagctccagagagacctg
gttaaagaggccatcgactcctacatcaaagctgacgacccgtcagcctacatggaggtg
gtcagcgcggccagcaagaacgataactgggaggatctggtgaagttccttcagatggct
cgtaagaaggcccgggagtcctacgtagagacagaactcatctttgctctggctaaaact
ggcagactggccgaactagatgagtttgttaacggccctaacaatgcccatatacaacag
gtgggagataggtgttttgaggagggcatgtatgatgctgccaagctgctgtataataat
gtgtccaactttgcccgcctggcgtccacgctggtccacctaggagagtaccaggctgct
gtggacagcgccaggaaagccaacagcacacgcacctggaaggaggtgtgttttgcgtgt
gtggctggggaggagtttcggttggctcagatctgtggtcttcacatcgtcatccacgct
gatgaactggaggagctcatcagtgactatcaggaccggggctattatgaggagctgata
gccctgttggaggcagcattgggtttggagcgtgctcacatgggcatgttcacagagctg
gccatcctctactccaaattcaaaccccagaagatgagagaacatctggaactcttctgg
tcccgtgtcaacatccctaaggtgctgcgagcggcggagcagtcccacctgtgggcggag
ctagtgtttctgtatgataaatatgaggagtatgacaatgctgtcctcacgatgatgtca
caccctactgacgcatggaaggaggtgcagttcaaggacatcattgctaagttggccaat
gtggagctgtactacaaatccctttccttttacctggattacaaacctctgctgacaaac
gaccttctgaccatactgtcaccacggttagaccacagccgggcggtcacatacttcacc
aagatgaaccagttgaagttggtaaagccttacctgcggtcagtccagagtcacaacaac
aagggagtcaacgaggccctcaataacctactgacagaggaggaggactaccagggtctg
agggcatcgattgatgcgtatggtaactttgacaccaatgctctggcccagagactggag
aagcatgagctgattgagttcagacgcatagcagcgtacctctacaaaggcaacaaccgc
tggagacagagcgtggaactctgcaagaaggacaaattatacaaggatgcaatgctgtat
gctgccgagtctaaggatgcagagttgactgagacactgctgcagtggttcctggaggag
ggtaggaaggagtgtttcgctgcctgtctgtttgcctcctatgacctgctgcaccctgat
gtggtgctggagctggcctggagacacaacatcatggactttgccatgccatacttcatc
caggtcatgagggagtatctcaccaaggttgatgaggttgcggagaaggtgacggtggac
aaactggaggagtcagaaagccaaaggaagactgaggaaaaagtcccagaacccaccccc
atagtgtttggtcaacagctgatgttgacagcaggttccgctccagtggctccccagcca
ggatatccaggaggctatggatacactgctccaggctaccccacccagcccccctacagc
tacaacatgtag
DBGET
integrated database retrieval system
