Oncorhynchus kisutch (coho salmon): 109896038
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Entry
109896038 CDS
T09179
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109896038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oki03009
]
109896038
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109896038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Phage_Coat_A
CDC48_2
Motif
Other DBs
NCBI-GeneID:
109896038
NCBI-ProteinID:
XP_020345823
Ensembl:
ENSOKIG00005020942
UniProt:
A0A8C7GXV4
LinkDB
All DBs
Position
LG8:24668159..24679092
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AA seq
309 aa
AA seq
DB search
MFSFNMFDHPMPRTFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVVAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERCYKAPEEPTEEEGDPNTWTEMDMRFRAFTGSGNRLDGK
KKGIEPSPVPIDPSDIKRGIPNYEYKVGRITFIRNSRPLPRKTTEDEDSEFIAFSGEGKS
LRKKGGRKL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttcaacatgtttgaccacccgatgccacggacattccaaaaccgcttctcc
actcaataccgctgctactctgtgtccatgctggcgggtcccaacgaccggtctgatgtg
gagaaaggaggaaaaattataatgccgccatctgcacttgaccaactaagcagacttaac
atcacctaccccatgttgttcaaacttaccaacaagaactctgacagaatgacacactgt
ggtgtcttggagtttgtagcagatgaggggatttgctacctgccacactggatgatgcag
aatctcctgctggaggaagggggcctggtccaggtggagagtgtgaacctcatggtggcc
acatactccaagttccagccacagagcccagacttcctggatatcactaaccccaaagca
gtgttggaaaatgccttgagaaactttgcctgcttaactacaggagatgttgtcgcaatt
aactacaatgaaaagatctatgaactgcgagtgatggagactaagccagacaaggccgta
tctatcattgaatgtgatatgaatgtggactttgatgcgccgcttggttacaaagaacca
gagaggtgttacaaagcaccagaggagcccacagaggaggaaggagaccccaacacttgg
actgaaatggacatgagattcagagctttcacaggttcaggcaatcgcctggatggcaaa
aagaaaggcatcgagcccagccccgtccccatcgatcccagtgacattaaaagagggatt
cctaactatgagtacaaggttggcaggatcaccttcatcagaaactccaggcctctgccc
aggaaaacaacagaggatgaggattcggaattcatcgccttctctggtgagggaaagtca
cttcgcaagaagggtggcagaaagctttga
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