Oncorhynchus kisutch (coho salmon): 109896065
Help
Entry
109896065 CDS
T09179
Name
(RefSeq) tRNA (uracil-5-)-methyltransferase homolog A
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oki03016
]
109896065
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
109896065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
Methyltransf_15
MTS
Ubie_methyltran
Methyltransf_4
Methyltransf_11
RRM_1
Cons_hypoth95
PrmA
N6_N4_Mtase
RRM_PARP14_3
Methyltransf_32
TRM5-TYW2_MTfase
Methyltransf_23
UPF0020
RrnaAD
CMAS
Methyltransf_18
RRM_occluded
TPMT
FtsJ
AviRa
RNA_binding
NodS
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
109896065
NCBI-ProteinID:
XP_020345859
Ensembl:
ENSOKIG00005010127
LinkDB
All DBs
Position
LG8:complement(22538580..22553495)
Genome browser
AA seq
625 aa
AA seq
DB search
MTDVGDIPVVGSPSLKEEKTSDPKEDAVDGVKTDEPKAEGGGEEAASSDPNNLYRYVQAD
LFTSEIFKVEIQNLPKFIGFNDLKKFLEKHRLNPHKIKLFGKQTFAFVTFKNEEERDKAM
KMVHGMQWKGRVLSVRLAKPKADPMLRKRGRDEAGSAGQPPSKRKEAEEDEAPLSIQIAN
VVTPLWNVPYEEQLRRKEQEVEGVLQRLAREIGNTNKAMLPWLFVQKEKYKRMCCPLEEI
CPSPSQVEYRNKCEFVIGIGANEEDKTIGFRLGKYKGGSCAVVGPSDSIHVTTEAKRVVS
EFQKFIRTTPYSVYSPETYEGHWKQLTVRTTRTKQAMAMVFFNPQKLEEKELNVLKSSMK
EYFTEGDGKESGVTSLYFVSEGQRQSPNPEDLPCELVAGEECIHEELLGLKFRISPHSFF
QVNTGAAEVLYSAVGEWAQLDKDSTVLDVCCGTGTIGISLAKRVRKVIGIEMCQEAVKDA
KVNAKINGLSNIEFHCGKAEDVFQMVLNAVVSPSITAIVDPPRAGLHSKVILAIRRAEHL
KRLVYVACNAKAAMNNFIDLCRAPSNRVRGAPFRPVRAMAVDLFPQTMHCEMLLLFERVD
YSSKSSSEKPEEMTQGTSEKPTTTT
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgttggtgacatcccagtggtaggttctccatcactgaaagaggagaagaca
tctgaccccaaagaagatgcagtagatggggtgaaaacagatgaacccaaagctgaaggt
ggaggagaagaagcagcttcttccgaccctaataatttgtaccgctacgtccaagcggac
ctcttcacctctgagatcttcaaagtggagatccagaaccttcccaaattcatcggtttc
aatgacttgaagaagttcctggagaagcatcgccttaacccgcacaagatcaaactgttc
gggaagcagacgtttgccttcgtcaccttcaagaacgaagaggagagggacaaggccatg
aagatggtgcacggcatgcagtggaagggccgggtgcttagtgtgcgcctggccaagccc
aaggcggaccctatgctcaggaagaggggacgggatgaggccgggagtgccgggcagccc
ccctccaagcggaaggaggcagaggaggatgaggcgccgctcagcatacagattgccaac
gtggtgacgcccctgtggaatgtgccttatgaggagcagctgaggaggaaggagcaggag
gtggagggggtgctgcagagactggccagagaaataggcaacaccaacaaagcgatgctg
ccctggctgtttgtgcagaaggagaagtacaagagaatgtgttgccctctggaagaaatt
tgcccctctccgtcacaggttgaatacaggaacaagtgtgagtttgtcattggtattgga
gcgaatgaagaggataagaccataggcttcagactggggaagtacaaagggggctcctgt
gccgtggtgggaccctcagacagcatccatgtcaccactgaggccaagagagtggtcagt
gagttccagaaattcatcaggacaaccccatactcagtgtacagccctgagacatacgag
ggccactggaagcagctaacagtgcggaccacaaggaccaagcaggccatggctatggtg
ttctttaacccacagaaacttgaggaaaaagaactaaatgtcctgaagagctctatgaaa
gagtatttcacagagggtgacgggaaagagagtggtgtaacttctctgtactttgtgtca
gagggacaaaggcaatcccctaacccggaggacttgccgtgtgagctggtagctggagag
gagtgtattcacgaggagcttcttggcctgaagttcaggatatccccccattctttcttc
caggtgaacacaggggcagctgaggtgctgtactcagctgtaggagaatgggcccagctg
gacaaggacagcactgtgctggacgtatgttgtgggacaggaaccattggcatctcactg
gctaagagggtgaggaaggtgattgggatagagatgtgtcaggaagcagtgaaggatgcc
aaagtcaacgcgaagatcaatgggctgagtaatattgagttccactgcggaaaggctgaa
gacgtgttccagatggtgctcaacgctgtcgtatcccccagcatcaccgccatcgtggac
ccaccgagagcgggcttacattcaaaggtcattctggcaatcagaagagcggagcatctg
aaaaggctggtttatgtggcatgcaatgccaaggcagccatgaacaacttcatagatctg
tgcagggctccctccaaccgtgtacgtggagctccgttccgtcccgtgcgggcaatggct
gtggacctcttcccccagaccatgcactgtgagatgctgctgctctttgagagggtggat
tacagctccaagagcagcagtgagaaacctgaagaaatgacccagggcactagcgagaag
ccaaccaccacaacttaa
DBGET
integrated database retrieval system
