Oncorhynchus kisutch (coho salmon): 109896088
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Entry
109896088 CDS
T09179
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109896088
03041 Spliceosome [BR:
oki03041
]
109896088
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109896088
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109896088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109896088
NCBI-ProteinID:
XP_020345908
Ensembl:
ENSOKIG00005004672
LinkDB
All DBs
Position
LG8:20643048..20653263
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AA seq
347 aa
AA seq
DB search
MMMMMDDEQPKTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIFDTAGNDPYCFVEFYEH
RHAAASLSAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDVKAAFG
PFGRISDARVVKDIATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPP
APKTTYETNTKHLAFDEVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFTPFGQIMEIRVFP
DKGYSFVRFNSHEGAAHAIVSVNGTSIDGHMVKCYWGKETPDMISSMQQVQQVPQQNKVG
FAAQPYGQYAQWYGNAQQIGQYVPNGWQVPTYGVYGQAQAWNQQGFQ
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatggacgacgaacagcccaaaaccctgtatgtagggaacttgtctagg
gatgtcactgagcccctcatcctacaggttttcacacagatcggcccctgcaagagctgt
aaaatgatttttgatactgcaggcaatgatccatactgctttgtggagttctatgaacac
aggcatgctgctgcttcgctgtctgccatgaatggacgtaaaattatgggtaaggaggtt
aaagtcaactgggccacaacaccaagcagtcagaagaaagacacaagcaatcatttccat
gtctttgttggagatctcagccccgaaatcacaacagatgatgtcaaagctgccttcggc
ccatttgggaggatatcggatgctcgtgtggtcaaagatattgccacagggaaatctaaa
ggctatggttttgtctctttcttcaacaagtgggatgcagagaatgccattcagcagatg
ggtggccaatggctaggtggcagacagatcaggaccaactgggccactagaaaaccccca
gcccctaaaaccacctatgaaaccaacaccaagcacctggcctttgatgaggtagtgaac
cagtcaagccccagtaactgcactgtgtactgtgggggagtcagcaccggtctaacagaa
caattgatgagacagaccttcaccccctttggacaaatcatggaaatccgtgtgttccca
gacaaaggatattcctttgtgaggtttaactctcacgagggagcagcccatgcaattgtg
tctgtgaatggtacttcgatagatggacatatggtgaagtgttactggggtaaagagacc
ccggacatgattagctctatgcagcaggttcagcaagttccccagcagaacaaagtgggc
tttgcagcccagccctatggccagtatgcccagtggtatggcaatgcccagcagattggc
cagtatgtccccaatgggtggcaggtacccacctatggcgtttacggccaggcccaggcc
tggaaccagcagggttttcagtaa
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integrated database retrieval system