KEGG   Oncorhynchus kisutch (coho salmon): 109896088
Entry
109896088         CDS       T09179                                 
Name
(RefSeq) nucleolysin TIA-1 isoform X1
  KO
K13201  nucleolysin TIA-1/TIAR
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109896088
   03041 Spliceosome [BR:oki03041]
    109896088
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     109896088
Spliceosome [BR:oki03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    109896088
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Calcipressin RRM_Nup35 Nup35_RRM_2
Other DBs
NCBI-GeneID: 109896088
NCBI-ProteinID: XP_020345908
Ensembl: ENSOKIG00005004672
LinkDB
Position
LG8:20643048..20653263
AA seq 347 aa
MMMMMDDEQPKTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIFDTAGNDPYCFVEFYEH
RHAAASLSAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDVKAAFG
PFGRISDARVVKDIATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPP
APKTTYETNTKHLAFDEVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFTPFGQIMEIRVFP
DKGYSFVRFNSHEGAAHAIVSVNGTSIDGHMVKCYWGKETPDMISSMQQVQQVPQQNKVG
FAAQPYGQYAQWYGNAQQIGQYVPNGWQVPTYGVYGQAQAWNQQGFQ
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgatgatgatgatggacgacgaacagcccaaaaccctgtatgtagggaacttgtctagg
gatgtcactgagcccctcatcctacaggttttcacacagatcggcccctgcaagagctgt
aaaatgatttttgatactgcaggcaatgatccatactgctttgtggagttctatgaacac
aggcatgctgctgcttcgctgtctgccatgaatggacgtaaaattatgggtaaggaggtt
aaagtcaactgggccacaacaccaagcagtcagaagaaagacacaagcaatcatttccat
gtctttgttggagatctcagccccgaaatcacaacagatgatgtcaaagctgccttcggc
ccatttgggaggatatcggatgctcgtgtggtcaaagatattgccacagggaaatctaaa
ggctatggttttgtctctttcttcaacaagtgggatgcagagaatgccattcagcagatg
ggtggccaatggctaggtggcagacagatcaggaccaactgggccactagaaaaccccca
gcccctaaaaccacctatgaaaccaacaccaagcacctggcctttgatgaggtagtgaac
cagtcaagccccagtaactgcactgtgtactgtgggggagtcagcaccggtctaacagaa
caattgatgagacagaccttcaccccctttggacaaatcatggaaatccgtgtgttccca
gacaaaggatattcctttgtgaggtttaactctcacgagggagcagcccatgcaattgtg
tctgtgaatggtacttcgatagatggacatatggtgaagtgttactggggtaaagagacc
ccggacatgattagctctatgcagcaggttcagcaagttccccagcagaacaaagtgggc
tttgcagcccagccctatggccagtatgcccagtggtatggcaatgcccagcagattggc
cagtatgtccccaatgggtggcaggtacccacctatggcgtttacggccaggcccaggcc
tggaaccagcagggttttcagtaa

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