Oncorhynchus kisutch (coho salmon): 109896094
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Entry
109896094 CDS
T09179
Name
(RefSeq) vesicle-associated membrane protein 8
KO
K08512
vesicle-associated membrane protein 8
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04130
SNARE interactions in vesicular transport
oki04140
Autophagy - animal
oki04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
109896094
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
109896094
04140 Autophagy - animal
109896094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109896094
Membrane trafficking [BR:
oki04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
109896094
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
Integrase_H2C2
Baculo_F
DUF5693
CcmD_alt
ODV-E18
LRRC37AB_C
RNF152_C
DUF3619
DotU
RIFIN
Orf78
Motif
Other DBs
NCBI-GeneID:
109896094
NCBI-ProteinID:
XP_020345921
Ensembl:
ENSOKIG00005004529
LinkDB
All DBs
Position
LG8:20562291..20566701
Genome browser
AA seq
119 aa
AA seq
DB search
MDNDLEQGEVVEQDKVRTLQSQVEGVKDIMTQNVDRILARGERLDDLMGKSEDLQAGAED
FKHTSQKVARSYWWKNMKLWVVIVVIVLVIILIIVLLSTGVIPTSSPVPPLPKPTKRSN
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggataatgatttggagcagggagaggtggtggagcaggacaaggtgaggaccctgcag
tctcaggtggagggagtgaaggacatcatgacccagaacgtggaccggatcctggcccgg
ggagagaggctggatgacttgatgggcaagtcagaggacctgcaggctggggctgaggac
ttcaagcacacgtcccagaaggtggctcgctcctactggtggaagaacatgaagctgtgg
gtggtgatcgtggtcattgtcctcgtcataatcctcatcatcgtactgctcagcactggc
gtcatcccaaccagctcccctgttcccccacttcccaaacctactaaaagatcaaactag
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